RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C11orf91Q3C1V1 193 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 ZMAT1Q5H9K5 638 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 FGD3Q5JSP0 725 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 THEM4Q5T1C6 240 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 CD300LDQ6UXZ3 194 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 LINC00299Q6ZSB3 139 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 KRT73Q86Y46 540 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 ZNF101Q8IZC7 436 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 Q8NFD4 153 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR9Q2Q8NGE9 314 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR8B3Q8NGG8 313 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR4D11Q8NGI4 311 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR52J3Q8NH60 311 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR5R1Q8NH85 324 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR2T6Q8NHC8 308 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 VANGL1Q8TAA9 524 aaPredicted RBP9.57□□□□□ -0.88
TRIM56-204ENST00000487252 KLF14Q8TD94 323 aaPredicted RBP9.57□□□□□ -0.88
TRIM56-204ENST00000487252 FCGR1BQ92637 280 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 RORBQ92753 470 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 OR8B2Q96RD0 313 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 DGCR6LQ9BY27 220 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 SLC19A3Q9BZV2 496 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 ZNF556Q9HAH1 456 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 PLGRKTQ9HBL7 147 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 MSL2Q9HCI7 577 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 PALMDQ9NP74 551 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 ACOT13Q9NPJ3 140 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.57□□□□□ -0.88
TRIM56-204ENST00000487252 CLN8Q9UBY8 286 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 WDR45Q9Y484 360 aa9.57□□□□□ -0.88
TRIM56-204ENST00000487252 LSM4Q9Y4Z0 139 aaKnown RBP9.57□□□□□ -0.88
TRIM56-204ENST00000487252 TRBV4-1A0A0J9YWV2 114 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 A0A1W2PRQ8 180 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 AKAP8O43823 692 aaKnown RBP9.56□□□□□ -0.88
TRIM56-204ENST00000487252 MPZL2O60487 215 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 GASTP01350 101 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 H1F0P07305 194 aaKnown RBP9.56□□□□□ -0.88
TRIM56-204ENST00000487252 FBP1P09467 338 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 NR2F1P10589 423 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 MAP2K4P45985 399 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 DGCR6Q14129 220 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 SEC23BQ15437 767 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 TBCEQ15813 527 aaPredicted RBP9.56□□□□□ -0.88
TRIM56-204ENST00000487252 ZNF404Q494X3 552 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 SLX4IPQ5VYV7 408 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 CRIP3Q6Q6R5 217 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 COMTD1Q86VU5 262 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 SLC22A24Q8N4F4 322 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 AQP11Q8NBQ7 271 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 SCCPDHQ8NBX0 429 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 OR1J2Q8NGS2 313 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 FAM81AQ8TBF8 368 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 XAGE5Q8WWM1 108 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 GGHQ92820 318 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 LHX4Q969G2 390 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 MYDGFQ969H8 173 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 TRNT1Q96Q11 434 aaKnown RBP9.56□□□□□ -0.88
TRIM56-204ENST00000487252 DCUN1D5Q9BTE7 237 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 GCM1Q9NP62 436 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 CALML5Q9NZT1 146 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 TMCC3Q9ULS5 477 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 A4GNTQ9UNA3 340 aa9.56□□□□□ -0.88
TRIM56-204ENST00000487252 PLECQ15149 4684 aaKnown RBP9.56□□□□□ -0.88
TRIM56-204ENST00000487252 SLC22A1O15245 554 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 CDK1P06493 297 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 OSMP13725 252 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 ZNF182P17025 639 aaPredicted RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 WNT5AP41221 380 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 CDC42P60953 191 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 SNRPGP62308 76 aaKnown RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 EGR4Q05215 589 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 C1DQ13901 141 aaKnown RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 SPCS2Q15005 226 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 PTGES3Q15185 160 aaKnown RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 SPATA46Q5T0L3 261 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 CARD17Q5XLA6 110 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 C12orf73Q69YU5 71 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 NLRC3Q7RTR2 1065 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 HMGN2P46Q86SG4 172 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 RBM45Q8IUH3 476 aaKnown RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 CROCCP3Q8IVE0 287 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 STK35Q8TDR2 534 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 NPRL2Q8WTW4 380 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 WFDC6Q9BQY6 131 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 OR2J1Q9GZK6 312 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 CCDC90BQ9GZT6 254 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 B3GAT2Q9NPZ5 323 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 MAN2C1Q9NTJ4 1040 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 SERTAD4Q9NUC0 356 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 RHCGQ9UBD6 479 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 WARS2Q9UGM6 360 aaKnown RBP9.55□□□□□ -0.88
TRIM56-204ENST00000487252 IL19Q9UHD0 177 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
TRIM56-204ENST00000487252 A0A1B0GVG6 124 aa9.54□□□□□ -0.88
TRIM56-204ENST00000487252 IFNL4K9M1U5 179 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms