RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 DYNC2LI1Q8TCX1 351 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 GIPC3Q8TF64 312 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SNX33Q8WV41 574 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MARC2Q969Z3 335 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MUCL1Q96DR8 90 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 FRG2BQ96QU4 278 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 RBBP8Q99708 897 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 NICN1Q9BSH3 213 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 PCGF1Q9BSM1 259 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 PLA2G12AQ9BZM1 189 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SLC19A3Q9BZV2 496 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 HRASLSQ9HDD0 168 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 NTMQ9P121 344 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MRM2Q9UI43 246 aaKnown RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MRTO4Q9UKD2 239 aaKnown RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SNX12Q9UMY4 172 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 A4GNTQ9UNA3 340 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 USP22Q9UPT9 525 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 UTP11Q9Y3A2 253 aaKnown RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 RNF11Q9Y3C5 154 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 POLR3HQ9Y535 204 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 X6R8D5 127 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MGAM2Q2M2H8 2515 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 PQLC2LA1A4F0 135 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 DPRXA6NFQ7 191 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 B4DXG7 233 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 SLC28A1O00337 649 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RS1O15537 224 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TCF21O43680 179 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CXCL13O43927 109 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 EIF1BO60739 113 aaKnown RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GCM2O75603 506 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ANGPTL1O95841 491 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 PET100P0DJ07 73 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 IGHV4-31P0DP07 118 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ETS2P15036 469 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF17P17021 662 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TSPAN8P19075 237 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 DRD4P21917 467 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 PCMT1P22061 227 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GLRA1P23415 457 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 IGFBP5P24593 272 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GTF2E2P29084 291 aaKnown RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 C21orf33P30042 268 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ECHS1P30084 290 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 AGTR1P30556 359 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 EIF1P41567 113 aaKnown RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 PTGFRP43088 359 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RAB13P51153 203 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CDH11P55287 796 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GNG11P61952 73 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ESRRGP62508 458 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 HPCAP84074 193 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CAV1Q03135 178 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ROM1Q03395 351 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 AQP6Q13520 282 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RNPS1Q15287 305 aaKnown RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TRIP10Q15642 601 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 MICBQ29980 383 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RNF151Q2KHN1 245 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 FAM120AOSQ5T036 256 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 REEP3Q6NUK4 255 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 MFSD12Q6NUT3 480 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RPL13AP3Q6NVV1 102 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 COMMD6Q7Z4G1 85 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GOLGA7Q7Z5G4 137 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 GGNQ86UU5 652 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 HS3ST5Q8IZT8 346 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 SPAG16Q8N0X2 631 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 RFLNBQ8N5W9 214 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ARIH2OSQ8N7S6 290 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TMEM239Q8WW34 195 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ST8SIA1Q92185 356 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ST8SIA2Q92186 375 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TM4SF18Q96CE8 201 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 FOXRED1Q96CU9 486 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CNRIP1Q96F85 164 aaPredicted RBP5.89□□□□□ -1.47
HDAC3-209ENST00000486618 NSL1Q96IY1 281 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 VSTM2LQ96N03 204 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF681Q96N22 645 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 NIPSNAP1Q9BPW8 284 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TBL1XR1Q9BZK7 514 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CCDC90BQ9GZT6 254 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 L2HGDHQ9H9P8 463 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 ABCB9Q9NP78 766 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 TIGARQ9NQ88 270 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CBLN4Q9NTU7 201 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 BTNL2Q9UIR0 455 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 SNX24Q9Y343 169 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 NDUFAF1Q9Y375 327 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 MMP24Q9Y5R2 645 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 SAR1BQ9Y6B6 198 aa5.89□□□□□ -1.47
HDAC3-209ENST00000486618 CUBNO60494 3623 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 A0A1B0GTI1 187 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 A0A1W2PPM1 405 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 C17orf51A8MQB3 221 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 SHISA9B4DS77 424 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 USP17L23D6RBM5 183 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 M0R036 132 aa5.88□□□□□ -1.47
HDAC3-209ENST00000486618 DLGAP1O14490 977 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms