RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CHPT1Q8WUD6 406 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 SLC25A44Q96H78 314 aaPredicted RBP8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 TSSK2Q96PF2 358 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 MRI1Q9BV20 369 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 SF3B5Q9BWJ5 86 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 MRPL13Q9BYD1 178 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 BARHL1Q9BZE3 327 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 SLC17A5Q9NRA2 495 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 CBLN4Q9NTU7 201 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 RABL2AQ9UBK7 228 aaPredicted RBP8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 POU2F3Q9UKI9 436 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 COPS3Q9UNS2 423 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF281Q9Y2X9 895 aa8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 SIRT4Q9Y6E7 314 aaPredicted RBP8.13□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF726A6NNF4 738 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 RNF212BA8MTL3 300 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 H7C1C5 153 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 J3QRK9 145 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF593O00488 134 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 LILRA1O75019 489 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 UPK3AO75631 287 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 UPK1BO75841 260 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 ABHD16AO95870 558 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 CTLA4P16410 223 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 PTAFRP25105 342 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 DCTDP32321 178 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 TNFSF8P32971 234 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 P2RY4P51582 365 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 DEFA1P59665 94 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 DEFA3P59666 94 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 LCN6P62502 163 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 ALKBH1Q13686 389 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 ZMAT1Q5H9K5 638 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 LIPNQ5VXI9 398 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 TMEM108Q6UXF1 575 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 Q6ZNX1 250 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 GLB1L2Q8IW92 636 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 FBXL14Q8N1E6 418 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 GDPD1Q8N9F7 314 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 SLC26A10Q8NG04 563 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 CMTM3Q96MX0 182 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 OR8B4Q96RC9 309 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 KCNS3Q9BQ31 491 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 MROQ9BYG7 248 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 COMMD4Q9H0A8 199 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 TBCCD1Q9NVR7 557 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 B3GAT1Q9P2W7 334 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 UPB1Q9UBR1 384 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 MALT1Q9UDY8 824 aa8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 MRM2Q9UI43 246 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-208ENST00000486159 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 IGHV1-18A0A0C4DH31 117 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 TVP23AA6NH52 213 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 A8MV72 311 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 CTDSP2O14595 271 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 RGS5O15539 181 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 TRAF3IP2O43734 574 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 HLA-DOBP13765 273 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SELENOPP49908 381 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 PSMD7P51665 324 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF133P52736 654 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 RIDAP52758 137 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 HCCSP53701 268 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 BIDP55957 195 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 CLRN1P58418 232 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 MXD1Q05195 221 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 MELKQ14680 651 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 RAB35Q15286 201 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 ETFDHQ16134 617 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 TMEM249Q2WGJ8 235 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 AAED1Q7RTV5 226 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 DPY19L4Q7Z388 723 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 KRT77Q7Z794 578 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 GPAT4Q86UL3 456 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 MYPOPQ86VE0 399 aaPredicted RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 WDFY1Q8IWB7 410 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 ZCCHC24Q8N2G6 241 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SYT14Q8NB59 555 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 NOXO1Q8NFA2 376 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 OR5AK2Q8NH90 309 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SETD6Q8TBK2 473 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 THEM6Q8WUY1 208 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 NSMAFQ92636 917 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 PPP1R14BQ96C90 147 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 FBXO17Q96EF6 278 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SORCS2Q96PQ0 1159 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SLITRK2Q9H156 845 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 ZCCHC4Q9H5U6 513 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 RERGLQ9H628 205 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 NIPAL2Q9H841 368 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 MRPL22Q9NWU5 206 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms