RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 ZNF362Q5T0B9 420 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-205ENST00000485397 DRAM2Q6UX65 266 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 DCXRQ7Z4W1 244 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 LNX2Q8N448 690 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 OR9Q2Q8NGE9 314 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 OR56B2PQ8NGI1 322 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 OR9Q1Q8NGQ5 310 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 OR2T4Q8NH00 348 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 IL1RAPQ9NPH3 570 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 C1RLQ9NZP8 487 aa15.94■□□□□ 0.14
COL27A1-205ENST00000485397 MRPL15Q9P015 296 aaKnown RBP15.94■□□□□ 0.14
COL27A1-205ENST00000485397 TRAV38-1A0A0B4J264 116 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 OOEPA6NGQ2 149 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 A6NLC8 198 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 KNG1P01042 644 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 CRYBA1P05813 215 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 LIPFP07098 398 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 RAG2P55895 527 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 ZDHHC21Q8IVQ6 265 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 GCSAMQ8N6F7 178 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 PLPP7Q8NBV4 271 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 SLC37A3Q8NCC5 494 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 OR52L1Q8NGH7 329 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 OR8D4Q8NGM9 314 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 OR4F5Q8NH21 305 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 WFDC12Q8WWY7 111 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 WDFY2Q96P53 400 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 CDRT15Q96T59 188 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 BTBD10Q9BSF8 475 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 COPS4Q9BT78 406 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 FAM107BQ9H098 131 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 BEX1Q9HBH7 125 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 CENPMQ9NSP4 180 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 COMMD3-BMI1R4GMX3 469 aa15.93■□□□□ 0.14
COL27A1-205ENST00000485397 A0A1B0GUS0 222 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 SPARCP09486 303 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 ARF6P62330 175 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 SAMD4BQ5PRF9 694 aaKnown RBP15.92■□□□□ 0.14
COL27A1-205ENST00000485397 FAM90A1Q86YD7 464 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 PGAM4Q8N0Y7 254 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 TMEM86BQ8N661 226 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 SPERTQ8NA61 448 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 ZNF511Q8NB15 262 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 GATAD2BQ8WXI9 593 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 LHX4Q969G2 390 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 SLAMF6Q96DU3 332 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 FAM71F1Q96KD3 344 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-205ENST00000485397 KCNJ15Q99712 375 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 SIRPDQ9H106 197 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 MED4Q9NPJ6 270 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 PDP1Q9P0J1 537 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-205ENST00000485397 KIF17Q9P2E2 1029 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 LYVE1Q9Y5Y7 322 aa15.92■□□□□ 0.14
COL27A1-205ENST00000485397 IGHV3OR15-7A0A075B7D8 119 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 hCG_1807616A0A1W2PRN6 198 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 TNFRSF11BO00300 401 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 NDUFA2O43678 99 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 GASTP01350 101 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 GYPBP06028 91 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 HMGA2P52926 109 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 TAF13Q15543 124 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 PDLIM3Q53GG5 364 aaPredicted RBP15.91■□□□□ 0.14
COL27A1-205ENST00000485397 METTL11BQ5VVY1 283 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 OLFML2AQ68BL7 652 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 RPL13AP3Q6NVV1 102 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 C17orf107Q6ZR85 190 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 BTN2A1Q7KYR7 527 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 FGFRL1Q8N441 504 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 PNLDC1Q8NA58 520 aaKnown RBP15.91■□□□□ 0.14
COL27A1-205ENST00000485397 TRIM36Q9NQ86 728 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 ACOXLQ9NUZ1 547 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 IL20Q9NYY1 176 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 CMYA5Q8N3K9 4069 aa15.91■□□□□ 0.14
COL27A1-205ENST00000485397 IGHV1-69DA0A0B4J2H0 117 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-205ENST00000485397 ZNF593O00488 134 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-205ENST00000485397 DVL1O14640 695 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 SNX3O60493 162 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 KRT36O76013 467 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 NDUFA7O95182 113 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 LHBP01229 141 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 IGHV1-69P01742 117 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 FMO3P31513 532 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 ENTPD1P49961 510 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 ELF3P78545 371 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-205ENST00000485397 PPP1R8Q12972 351 aaKnown RBP15.9■□□□□ 0.14
COL27A1-205ENST00000485397 CRMP1Q14194 572 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 PCK2Q16822 640 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 ZNF770Q6IQ21 691 aaPredicted RBP15.9■□□□□ 0.14
COL27A1-205ENST00000485397 RASSF6Q6ZTQ3 369 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 C11orf53Q8IXP5 236 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 PDZD9Q8IXQ8 264 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 OR4C15Q8NGM1 316 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 TSSK6Q9BXA6 273 aa15.9■□□□□ 0.14
COL27A1-205ENST00000485397 A0A1B0GW55 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 CLPSL1A2RUU4 121 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 TBX1O43435 398 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L2P0CJ85 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L3P0CJ86 424 aa15.89■□□□□ 0.13
COL27A1-205ENST00000485397 DUX4L4P0CJ87 422 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms