RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 K7ERQ8 282 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 RNF113AO15541 343 aaKnown RBP2.38□□□□□ -2.03
SMC4-215ENST00000484799 CD5LO43866 347 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 GMDSO60547 372 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 SLC16A7O60669 478 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 RAD1O60671 282 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 RP2O75695 350 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 VAPBO95292 243 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 IGKV1-17P01599 117 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 BCHEP06276 602 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 PGA4P0DJD7 388 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 PGA3P0DJD8 388 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 BGNP21810 368 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 DTYMKP23919 212 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 ARR3P36575 388 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 SLC35B1P78383 322 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 RPL18AQ02543 176 aaKnown RBP2.38□□□□□ -2.03
SMC4-215ENST00000484799 SLAQ13239 276 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 DGCR6Q14129 220 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 GCSAMLQ5JQS6 135 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 PLET1Q6UQ28 207 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 ASCL4Q6XD76 172 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 NDUFAF7Q7L592 441 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 Q8N976 141 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 OR6N2Q8NGY6 317 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 NDNFQ8TB73 568 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 ZNF596Q8TC21 504 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 OR8D1Q8WZ84 308 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 RNF170Q96K19 258 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 BMFQ96LC9 184 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 ZNF317Q96PQ6 595 aaPredicted RBP2.38□□□□□ -2.03
SMC4-215ENST00000484799 CHAC1Q9BUX1 264 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 SPNS1Q9H2V7 528 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 SLC40A1Q9NP59 571 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 AGPAT3Q9NRZ7 376 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 GGA2Q9UJY4 613 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 CES1P1Q9UKY3 287 aa2.38□□□□□ -2.03
SMC4-215ENST00000484799 PRG3Q9Y2Y8 225 aaPredicted RBP2.38□□□□□ -2.03
SMC4-215ENST00000484799 MTCL1Q9Y4B5 1905 aaKnown RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 A0A0J9YXV3 536 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 LRCOL1A6NCL2 159 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 ERICH4A6NGS2 130 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 H7C1H1 209 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 H7C2Y5 167 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 RFXANKO14593 260 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PRMT5O14744 637 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 TAAR5O14804 337 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 UPK1BO75841 260 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 OXTP01178 125 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 RHOCP08134 193 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 IGHV1-8P0DP01 117 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PSMC3P17980 439 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 SSTR5P35346 364 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PCK1P35558 622 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 ARL2P36404 184 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 CCR6P51684 374 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 C2orf54Q08AI8 447 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 ST3GAL4Q11206 333 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 ZNF266Q14584 549 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 USF2Q15853 346 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 ZFP2Q6ZN57 461 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 DAW1Q8N136 415 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 OTUD6BQ8N6M0 293 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 OR5AR1Q8NGP9 310 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PIFOQ8TCI5 191 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 BAALCQ8WXS3 180 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 TFGQ92734 400 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 CENPNQ96H22 339 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 ZBED3Q96IU2 234 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 OR2A5Q96R48 311 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 CAMK2N2Q96S95 79 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 TSNAXQ99598 290 aaKnown RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 MAP1LC3CQ9BXW4 147 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PLA2G2FQ9BZM2 168 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 SLIRPQ9GZT3 109 aaKnown RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 SYT4Q9H2B2 425 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 EDA2RQ9HAV5 297 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 TMEM27Q9HBJ8 222 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 CSNK1G1Q9HCP0 422 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 HMG20AQ9NP66 347 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 RGS18Q9NS28 235 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 DDX19AQ9NUU7 478 aaKnown RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 RBAKQ9NYW8 714 aaPredicted RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 CHMP5Q9NZZ3 219 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 ZMAT5Q9UDW3 170 aaKnown RBP2.37□□□□□ -2.03
SMC4-215ENST00000484799 CFL2Q9Y281 166 aa2.37□□□□□ -2.03
SMC4-215ENST00000484799 PIK3R4Q99570 1358 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.36□□□□□ -2.03
SMC4-215ENST00000484799 A0A0B4J2E0 115 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 IGHV1-69DA0A0B4J2H0 117 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 IGHV5-10-1A0A0J9YXX1 117 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 RAB19A4D1S5 217 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 DNASE2O00115 360 aaPredicted RBP2.36□□□□□ -2.03
SMC4-215ENST00000484799 DFFAO00273 331 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 ANGPTL7O43827 346 aa2.36□□□□□ -2.03
SMC4-215ENST00000484799 TRAPPC6AO75865 159 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms