RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 GK2Q14410 553 aaPredicted RBP11.26□□□□□ -0.61
CHD3-210ENST00000479080 ADAM5Q6NVV9 412 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 TMEM108Q6UXF1 575 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 SSX8Q7RTT4 187 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 ZNF676Q8N7Q3 588 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 OR1J1Q8NGS3 322 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 MARS2Q96GW9 593 aaKnown RBP11.26□□□□□ -0.61
CHD3-210ENST00000479080 REEP6Q96HR9 211 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 FAM71F1Q96KD3 344 aaPredicted RBP11.26□□□□□ -0.61
CHD3-210ENST00000479080 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 OR10A2Q9H208 303 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 PPP1R3EQ9H7J1 279 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 V9GYS6 101 aa11.26□□□□□ -0.61
CHD3-210ENST00000479080 HELZ2Q9BYK8 2649 aaKnown RBP11.26□□□□□ -0.61
CHD3-210ENST00000479080 ANKHD1Q8IWZ3 2542 aaKnown RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 A1L4Q6 167 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 PRSS44E7EML9 344 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 J3QW42 95 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 GABRPO00591 440 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 GABARAPO95166 117 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 THBS4P35443 961 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 KIR2DL3P43628 341 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 OR8B8Q15620 311 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 GPR107Q5VW38 600 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 FBXW12Q6X9E4 464 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 MEX3BQ6ZN04 569 aaKnown RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 OR52H1Q8NGJ2 320 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 ADAT3Q96EY9 351 aaPredicted RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 OR14A2Q96R54 314 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 FGF23Q9GZV9 251 aaPredicted RBP11.25□□□□□ -0.61
CHD3-210ENST00000479080 ENPP5Q9UJA9 477 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 FZR1Q9UM11 496 aa11.25□□□□□ -0.61
CHD3-210ENST00000479080 A6NHS1 94 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 A6NIN4 97 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 E7EQL1 145 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 XRCC2O43543 280 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 CRYAAP02489 173 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 SOX2P48431 317 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 CTF1Q16619 201 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
CHD3-210ENST00000479080 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
CHD3-210ENST00000479080 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 FAM222BQ8WU58 562 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 PIK3IP1Q96FE7 263 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 CENPOQ9BU64 300 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 COMMD4Q9H0A8 199 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 MYEF2Q9P2K5 600 aaKnown RBP11.24□□□□□ -0.61
CHD3-210ENST00000479080 HHLA2Q9UM44 414 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 STUB1Q9UNE7 303 aa11.24□□□□□ -0.61
CHD3-210ENST00000479080 CADP27708 2225 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 TRDV1A0A1B0GX56 115 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 A0A1W2PPK0 400 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 ANKRD61A6NGH8 418 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 ZNF879B4DU55 563 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 SYT7O43581 403 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 ATE1O95260 518 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 UCHL1P09936 223 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 GLRXP35754 106 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 GSK3AP49840 483 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 PSG7Q13046 419 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 ACSM3Q53FZ2 586 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 ZMAT1Q5H9K5 638 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 DOK3Q7L591 496 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 KRT74Q7RTS7 529 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 RNF144BQ7Z419 303 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 OR56B2PQ8NGI1 322 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 KLF14Q8TD94 323 aaPredicted RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 GPR148Q8TDV2 347 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 CMBLQ96DG6 245 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 RADILQ96JH8 1075 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 SPOCK3Q9BQ16 436 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 CHCHD6Q9BRQ6 235 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 BCL2L14Q9BZR8 327 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 SP140LQ9H930 580 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
CHD3-210ENST00000479080 ZNF275Q9NSD4 429 aaPredicted RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 TXNL4BQ9NX01 149 aaKnown RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 EIF3KQ9UBQ5 218 aaKnown RBP11.23□□□□□ -0.61
CHD3-210ENST00000479080 IGLV3-9A0A075B6K5 115 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 FAM221AA4D161 298 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 DHRS3O75911 302 aa11.22□□□□□ -0.61
CHD3-210ENST00000479080 CD3EP07766 207 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms