RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 SERPINI2O75830 405 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SEC14L2O76054 403 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 UBL3O95164 117 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 STAMBPO95630 424 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 PPP1R3DO95685 299 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SNAP29O95721 258 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 QDPRP09417 244 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 CECR9P0C854 216 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 DANCRP0C864 163 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 FCGR1AP12314 374 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ZNF35P13682 527 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 B4GALT1P15291 398 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 HIST1H1CP16403 213 aaKnown RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 NPR2P20594 1047 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 PTAFRP25105 342 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SLC6A6P31641 620 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ARR3P36575 388 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 CDKN2AP42771 156 aaKnown RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 CDH15P55291 814 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 P2RX3P56373 397 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 VAMP2P63027 116 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ERVK-25P63136 954 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 PPP2R2BQ00005 443 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NAAAQ02083 359 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ENDOGQ14249 297 aaKnown RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 PCK2Q16822 640 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 PGGHGQ32M88 737 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ZNF672Q499Z4 452 aaPredicted RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 FAM27BQ5VT28 67 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 CARD17Q5XLA6 110 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 C11orf71Q6IPW1 123 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 RRM2BQ7LG56 351 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SKA3Q8IX90 412 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 HS3ST5Q8IZT8 346 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NPEPL1Q8NDH3 523 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NUP37Q8NFH4 326 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 KBTBD8Q8NFY9 601 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SLC26A10Q8NG04 563 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 OR6N1Q8NGY5 312 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 GIPC3Q8TF64 312 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 DNAJC9Q8WXX5 260 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NRGNQ92686 78 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 MUCL1Q96DR8 90 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 PIK3IP1Q96FE7 263 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ZC3HAV1LQ96H79 300 aaKnown RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SAMD8Q96LT4 415 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SLC38A2Q96QD8 506 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 FEVQ99581 238 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NIPSNAP1Q9BPW8 284 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 WACQ9BTA9 647 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 NMNAT2Q9BZQ4 307 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 NDEL1Q9GZM8 345 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SYT4Q9H2B2 425 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 LIME1Q9H400 295 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 EGLN3Q9H6Z9 239 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 SIAEQ9HAT2 523 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 POLE4Q9NR33 117 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 ZNF701Q9NV72 531 aaPredicted RBP4.47□□□□□ -1.69
VPS45-207ENST00000477558 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 FBXL3Q9UKT7 428 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 FKBP7Q9Y680 259 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 U3KQV3 271 aa4.47□□□□□ -1.69
VPS45-207ENST00000477558 IGHV2OR16-5A0A0B4J2B6 119 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 A0A1W2PR80 420 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 GAGE12JA6NER3 117 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 ATP6V1G2-DDX39BF2Z307 99 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 H7C1C5 153 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 ARHGEF9O43307 516 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 KRT33AO76009 404 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 TOMM40O96008 361 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 HLA-HP01893 362 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 RAF1P04049 648 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 SERPINA5P05154 406 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 IGFBP1P08833 259 aaPredicted RBP4.46□□□□□ -1.69
VPS45-207ENST00000477558 CST2P09228 141 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 OR8G3PP0DMU2 310 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 ANXA8P13928 327 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 MSR1P21757 451 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 CALCRP30988 508 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 RPL4P36578 427 aaKnown RBP4.46□□□□□ -1.69
VPS45-207ENST00000477558 ACVR1BP36896 505 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 ERFP50548 548 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 ZNF83P51522 516 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 SLC25A1P53007 311 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 LINC00205P59089 165 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 LSM6P62312 80 aaKnown RBP4.46□□□□□ -1.69
VPS45-207ENST00000477558 LCN6P62502 163 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 TUBA1BP68363 451 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 HIST1H3AP68431 136 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 EFNB1P98172 346 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 CDK5Q00535 292 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 MYBPC1Q00872 1141 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 IL1RL1Q01638 556 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 CD47Q08722 323 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 GSG1Q2KHT4 349 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 KRTAP27-1Q3LI81 207 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 SLC36A3Q495N2 470 aa4.46□□□□□ -1.69
VPS45-207ENST00000477558 HIST2H3PS2Q5TEC6 136 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms