RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DHHO43323 396 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 ACSM4P0C7M7 580 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 PLA1AQ53H76 456 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 C19orf48Q6RUI8 117 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 GLDNQ6ZMI3 551 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 RBPMSQ93062 196 aaKnown RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 NTMQ9P121 344 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 WNT16Q9UBV4 365 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 BOKQ9UMX3 212 aaPredicted RBP9.85□□□□□ -0.83
COL27A1-204ENST00000477421 RALGAPA1Q6GYQ0 2036 aa9.85□□□□□ -0.83
COL27A1-204ENST00000477421 BORCS7-ASMTA0A0B4J1R7 106 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 SPRY1O43609 319 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 SSX5O60225 188 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 GDF9O60383 454 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 NME2P22392 152 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 SERPINF1P36955 418 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ATP1B3P54709 279 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 MC2RQ01718 297 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ESPL1Q14674 2120 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF362Q5T0B9 420 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 PXDC1Q5TGL8 231 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 DOK3Q7L591 496 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 UTP23Q9BRU9 249 aaKnown RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 LANCL2Q9NS86 450 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 OR5H15A6NDH6 313 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 TMEM127O75204 238 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ASAH2BP0C7U1 165 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ICAM2P13598 275 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 RPS4Y1P22090 263 aaKnown RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 DUSP1P28562 367 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 FOXK1P85037 733 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ARL6IP1Q15041 203 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 CNN3Q15417 329 aaKnown RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 EXT1Q16394 746 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 PGAP1Q75T13 922 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 TMED6Q8WW62 240 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 MCHR2Q969V1 340 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 CHST6Q9GZX3 395 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ARRDC1-AS1Q9H2J1 176 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 CRLF2Q9HC73 371 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 PRR13Q9NZ81 148 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 HTTP42858 3142 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 LOC102725191A0A1B0GVB3 256 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 CHRM2P08172 466 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 UBBP0CG47 229 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 TPT1P13693 172 aaKnown RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 EFNA3P52797 238 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 EGR4Q05215 589 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 IKZF1Q13422 519 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF695Q8IW36 515 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 MKXQ8IYA7 352 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ASB5Q8WWX0 329 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF416Q9BWM5 594 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 EXOSC3Q9NQT5 275 aaKnown RBP9.84□□□□□ -0.83
COL27A1-204ENST00000477421 OR14J1Q9UGF5 321 aa9.84□□□□□ -0.83
COL27A1-204ENST00000477421 LMX1BO60663 402 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 HLA-DQB1P01920 261 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 BGLAPP02818 100 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 MGMTP16455 207 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 CAMLGP49069 296 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 RGS19P49795 217 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 RIPPLY1Q0D2K3 151 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 SLC51BQ86UW2 128 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 GALNT16Q8N428 558 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 SEMA6DQ8NFY4 1073 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 TCEAL3Q969E4 200 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 ZNF501Q96CX3 271 aaPredicted RBP9.83□□□□□ -0.84
COL27A1-204ENST00000477421 RADILQ96JH8 1075 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 SAV1Q9H4B6 383 aaPredicted RBP9.83□□□□□ -0.84
COL27A1-204ENST00000477421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.83□□□□□ -0.841e-7■■□□□ 12.1
COL27A1-204ENST00000477421 SDHAF2Q9NX18 166 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 PLA2G3Q9NZ20 509 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 CLDN15P56746 228 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 GRB2P62993 217 aaKnown RBP9.83□□□□□ -0.84
COL27A1-204ENST00000477421 CEACAM16Q2WEN9 425 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 MRGPREQ86SM8 312 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 OR5L1Q8NGL2 311 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 KCNJ15Q99712 375 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 PCDHGA9Q9Y5G4 932 aaKnown RBP9.83□□□□□ -0.84
COL27A1-204ENST00000477421 MEIKINA0A087WXM9 373 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 PNLIPP16233 465 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 APLNRP35414 380 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 KIR3DL2P43630 455 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 TAS2R46P59540 309 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 RAB2AP61019 212 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 DMWDQ09019 674 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 FBXW12Q6X9E4 464 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 CCDC54Q8NEL0 328 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 NOXO1Q8NFA2 376 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 ARHGAP5-AS1Q96IT6 56 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 CSAG2Q9Y5P2 127 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 MPDZO75970 2070 aa9.83□□□□□ -0.84
COL27A1-204ENST00000477421 ANKRD20A5PA0PJZ0 165 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TIAF1O95411 115 aa9.82□□□□□ -0.84
COL27A1-204ENST00000477421 TSPAN15O95858 294 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms