RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MALLQ13021 153 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 WDR38Q5JTN6 314 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 UNQ6126/PRO20091Q6UXV3 157 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 MRPL21Q7Z2W9 205 aaKnown RBP13.53□□□□□ -0.24
COPS3-207ENST00000477299 LURAP1LQ8IV03 231 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 ELMOD2Q8IZ81 293 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 ZNF786Q8N393 782 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 OR52H1Q8NGJ2 320 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 OR51E1Q8TCB6 317 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
COPS3-207ENST00000477299 SPSB4Q96A44 273 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 JAM3Q9BX67 310 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 OR10A2Q9H208 303 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 DYNLRB1Q9NP97 96 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 CNOT2Q9NZN8 540 aaKnown RBP13.53□□□□□ -0.24
COPS3-207ENST00000477299 FRRS1LQ9P0K9 344 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 NUFIP1Q9UHK0 495 aaKnown RBP13.53□□□□□ -0.24
COPS3-207ENST00000477299 CCDC168Q8NDH2 2452 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 VPS13CQ709C8 3753 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 hCG_38984A0A1B0GV85 526 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 CD300LBA8K4G0 201 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 LYNX1G3V0Z9 82 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 M0R233 179 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 XRCC2O43543 280 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 SPRY3O43610 288 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 LMX1BO60663 402 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 NCR1O76036 304 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 CDK1P06493 297 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 HTR1AP08908 422 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 LYNX1P0DP58 116 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 GSK3AP49840 483 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 SLC35A2P78381 396 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 TSTQ16762 297 aaKnown RBP13.52□□□□□ -0.25
COPS3-207ENST00000477299 ZNF829Q3KNS6 432 aaPredicted RBP13.52□□□□□ -0.25
COPS3-207ENST00000477299 DMRTC1Q5HYR2 192 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 KRTAP1-3Q8IUG1 177 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 C1orf174Q8IYL3 243 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 STX19Q8N4C7 294 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 ZNF485Q8NCK3 441 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 GATAD2BQ8WXI9 593 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 COG8Q96MW5 612 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 DUSP21Q9H596 190 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 GPR84Q9NQS5 396 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 SNX5Q9Y5X3 404 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 PMF1-BGLAPU3KQ54 211 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
COPS3-207ENST00000477299 IGHV3-64DA0A0J9YX35 117 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 GGT3PA6NGU5 568 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 A6NIN4 97 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 C17orf100A8MU93 164 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 IQCF6A8MYZ5 107 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 H3BSA7 217 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 H7C417 338 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 MLNRO43193 412 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 IGLV3-1P01715 115 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 IGHV1-46P01743 117 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 HPXP02790 462 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 MT-ND2P03891 347 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 TUBG1P23258 451 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 PPOXP50336 477 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 ATP5J2P56134 94 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 SELENOVP59797 346 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 CCL8P80075 99 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 BCL2L15Q5TBC7 163 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 FAM220AQ7Z4H9 259 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 KLBQ86Z14 1044 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 TGIF2LYQ8IUE0 185 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 OR8G5Q8NG78 346 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 NINJ1Q92982 152 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 MBD6Q96DN6 1003 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 FAM71F1Q96KD3 344 aaPredicted RBP13.51□□□□□ -0.25
COPS3-207ENST00000477299 CXorf56Q9H5V9 222 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 TUBG2Q9NRH3 451 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 BEX4Q9NWD9 120 aaPredicted RBP13.51□□□□□ -0.25
COPS3-207ENST00000477299 EXOSC1Q9Y3B2 195 aaKnown RBP13.51□□□□□ -0.25
COPS3-207ENST00000477299 TANC2Q9HCD6 1990 aa13.51□□□□□ -0.25
COPS3-207ENST00000477299 IRGMA1A4Y4 181 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 ACOD1A6NK06 481 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 SSX4O60224 188 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 TACSTD2P09758 323 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 CCDC159P0C7I6 412 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 PAX1P15863 534 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 SELEP16581 610 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 CA6P23280 308 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 COL8A2P25067 703 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 ZNF81P51508 661 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 ART1P52961 327 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 KCTD20Q7Z5Y7 419 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 SYS1Q8N2H4 156 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 KLHL36Q8N4N3 616 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 ZFP41Q8N8Y5 198 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 OR10AD1Q8NGE0 317 aa13.5□□□□□ -0.25
COPS3-207ENST00000477299 GSX2Q9BZM3 304 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms