RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 EDF1O60869 148 aaKnown RBP9.8□□□□□ -0.84
HDAC6-219ENST00000476625 TSPAN9O75954 239 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 SERPINA1P01009 418 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 PYCR1P32322 319 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 GGT2P36268 569 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 IKZF1Q13422 519 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 HABP2Q14520 560 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-219ENST00000476625 PCK2Q16822 640 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 RFX4Q33E94 735 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 ANKDD1AQ495B1 522 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 CDONQ4KMG0 1287 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 IFI44LQ53G44 452 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 FGD3Q5JSP0 725 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 CGB2Q6NT52 195 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 FAM86B1Q8N7N1 296 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 CELF2-AS1Q8N7Q2 184 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 SDR9C7Q8NEX9 313 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 OR5T2Q8NGG2 359 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 OR56B2PQ8NGI1 322 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 OR52J3Q8NH60 311 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 LRRC29Q8WV35 223 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 RCN3Q96D15 328 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 ATP6V1G3Q96LB4 118 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 GPX7Q96SL4 187 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-219ENST00000476625 DPAGT1Q9H3H5 408 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 ELL3Q9HB65 397 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-219ENST00000476625 SNTG1Q9NSN8 517 aa9.8□□□□□ -0.84
HDAC6-219ENST00000476625 AURKAIP1Q9NWT8 199 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-219ENST00000476625 TRAV38-1A0A0B4J264 116 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 OR6C68A6NDL8 312 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 UNC119BA6NIH7 251 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 H3BUX3 64 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 M0R135 149 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 CXCR6O00574 342 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 NME4O00746 187 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 AHCYL1O43865 530 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 PTBP3O95758 552 aaKnown RBP9.79□□□□□ -0.84
HDAC6-219ENST00000476625 OPN1MWP04001 364 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 LIPFP07098 398 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 OPN1MW2P0DN77 364 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 OPN1MW3P0DN78 364 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 HIST1H1CP16403 213 aaKnown RBP9.79□□□□□ -0.84
HDAC6-219ENST00000476625 SAA4P35542 130 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 HERPUD1Q15011 391 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 NSUN5P1Q3KNT7 163 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 CBLL1Q75N03 491 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
HDAC6-219ENST00000476625 KLHDC1Q8N7A1 406 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 LY6G5BQ8NDX9 201 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 LZICQ8WZA0 190 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 ERGIC1Q969X5 290 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 ZNF799Q96GE5 643 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 SH3GL1Q99961 368 aa9.79□□□□□ -0.84
HDAC6-219ENST00000476625 INTS9Q9NV88 658 aaKnown RBP9.79□□□□□ -0.84
HDAC6-219ENST00000476625 MEIOCA2RUB1 952 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 ANKRD61A6NGH8 418 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 CHST1O43916 411 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 TXNDC12O95881 172 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 LHBP01229 141 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 HLA-DQA2P01906 255 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 FBP1P09467 338 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 VSIG10L2P0DP72 767 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 GABRA5P31644 462 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 IFNA8P32881 189 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 PRKXP51817 358 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 EFNB2P52799 333 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 LIPEQ05469 1076 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 MALLQ13021 153 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 SLC35F1Q5T1Q4 408 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 ZBTB37Q5TC79 503 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 TEX36Q5VZQ5 186 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 GPR139Q6DWJ6 353 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 HCP5Q6MZN7 132 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 DPY19L2P2Q6ZN68 376 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 FKBP9P1Q75LS8 142 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 ADCK1Q86TW2 530 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 SLC15A3Q8IY34 581 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 LINC00471Q8N535 108 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 OR51L1Q8NGJ5 315 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 FANK1Q8TC84 345 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 STON2Q8WXE9 905 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 H1FXQ92522 213 aaKnown RBP9.78□□□□□ -0.84
HDAC6-219ENST00000476625 TNFRSF14Q92956 283 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 AJUBAQ96IF1 538 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 SAR1AQ9NR31 198 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 CYB5R1Q9UHQ9 305 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 AURKCQ9UQB9 309 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 KPTNQ9Y664 436 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 ENPP4Q9Y6X5 453 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 V9GYQ6 96 aa9.78□□□□□ -0.84
HDAC6-219ENST00000476625 A0A1B0GVI7 797 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 HTR3EA5X5Y0 456 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 GPR37O15354 613 aa9.77□□□□□ -0.85
HDAC6-219ENST00000476625 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
HDAC6-219ENST00000476625 TROVE2P10155 538 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC6-219ENST00000476625 CD28P10747 220 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms