RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SLC17A5Q9NRA2 495 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ACOXLQ9NUZ1 547 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 TBCCD1Q9NVR7 557 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 B3GNT2Q9NY97 397 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 CCDC59Q9P031 241 aaKnown RBP6.12□□□□□ -1.43
SHQ1-207ENST00000475558 ADAM30Q9UKF2 790 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 CLEC4AQ9UMR7 237 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 DHDHQ9UQ10 334 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SLC22A13Q9Y226 551 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 SPEF1Q9Y4P9 236 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PEX16Q9Y5Y5 336 aa6.12□□□□□ -1.43
SHQ1-207ENST00000475558 PHF3Q92576 2039 aaKnown RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF469Q96JG9 3925 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TRBV5-5A0A0J9YX44 114 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 NKX2-6A6NCS4 301 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 FAM90A27PA6NNH2 459 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 E9PI62 339 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 M0R135 149 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 CASKO14936 926 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 MAGEB3O15480 346 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNHIT1O43257 154 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SYNGR3O43761 229 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TNFSF13O75888 250 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TPPPO94811 219 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 GPANK1O95872 356 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 LALBAP00709 142 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ALDOBP05062 364 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ADRA2AP08913 450 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 MMP7P09237 267 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 CD79AP11912 226 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SELEP16581 610 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 COX5AP20674 150 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 IL32P24001 234 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 STOMP27105 288 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PCSK6P29122 969 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 RAD52P43351 418 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 MAP2K3P46734 347 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 CX3CR1P49238 355 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 VBP1P61758 197 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 GALK2Q01415 458 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 FABP5Q01469 135 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TFF3Q07654 80 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 MOGQ16653 247 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TBC1D28Q2M2D7 210 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SLC25A35Q3KQZ1 300 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 KRTAP27-1Q3LI81 207 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 TBRG1Q3YBR2 411 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF404Q494X3 552 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 GLT8D1Q68CQ7 371 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 CORO6Q6QEF8 472 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SLC16A12Q6ZSM3 486 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 Q6ZSR3 168 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 LINC00346Q8IVM7 164 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 GABRG1Q8N1C3 465 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF610Q8N9Z0 462 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 C15orf40Q8WUR7 153 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 SLC25A46Q96AG3 418 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 APOBEC3DQ96AK3 386 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF799Q96GE5 643 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PGAM5Q96HS1 289 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PGLYRP3Q96LB9 341 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ALKBH3Q96Q83 286 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 C1QTNF5Q9BXJ0 243 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZCCHC4Q9H5U6 513 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ABCB9Q9NP78 766 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PNRC2Q9NPJ4 139 aaKnown RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 G6PC2Q9NQR9 355 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PCDHB16Q9NRJ7 776 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF275Q9NSD4 429 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-207ENST00000475558 FAM206AQ9NX38 181 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ABRACLQ9P1F3 81 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 PRSS50Q9UI38 385 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 KLHDC2Q9Y2U9 406 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 FAM215AQ9Y5M1 114 aa6.11□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF407Q9C0G0 2248 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 OR5H1A6NKK0 313 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 C16orf97H3BN30 126 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 DOK2O60496 412 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CLPXO76031 633 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CDRT1O95170 752 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 ATE1O95260 518 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 LCATP04180 440 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 ANXA2P07355 339 aaKnown RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 ITGA5P08648 1049 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 B4GALT1P15291 398 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 RAB3BP20337 219 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CCL1P22362 96 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 CRYGSP22914 178 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 IGHV1-2P23083 117 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 DNASE1P24855 282 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 APEX1P27695 318 aaKnown RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 GNALP38405 381 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PSMB10P40306 273 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 HTR5AP47898 357 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 SLC6A9P48067 706 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 PRKXP51817 358 aa6.1□□□□□ -1.43
SHQ1-207ENST00000475558 ZNF121P58317 390 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-207ENST00000475558 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms