RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MAP6Q96JE9 813 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 MYCBPQ99417 103 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF184Q99676 751 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ABHD6Q9BV23 337 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ADGRL4Q9HBW9 690 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 TREM2Q9NZC2 230 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 PURGQ9UJV8 347 aaKnown RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 RAB26Q9ULW5 256 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 F5H5K5 113 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 H2BFMP0C1H6 154 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 OR2T7P0C7T2 308 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 RAC2P15153 192 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 THBS2P35442 1172 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 TPTEP56180 551 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 GRB2P62993 217 aaKnown RBP15.82■□□□□ 0.12
CCDC171-206ENST00000474193 SPATC1Q76KD6 591 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 RHOUQ7L0Q8 258 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 KRT77Q7Z794 578 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 OR10H4Q8NGA5 316 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 OR2T27Q8NH04 317 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 OR51F2Q8NH61 342 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 CNIH3Q8TBE1 160 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 TMEM158Q8WZ71 300 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 SLC7A6Q92536 515 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 SOX7Q9BT81 388 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 MSL2Q9HCI7 577 aa15.82■□□□□ 0.12
CCDC171-206ENST00000474193 IRGMA1A4Y4 181 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ZSCAN5BA6NJL1 495 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 FADS2O95864 444 aaKnown RBP15.81■□□□□ 0.12
CCDC171-206ENST00000474193 APOC1P02654 83 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 CD55P08174 381 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 DBTP11182 482 aaKnown RBP15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ALOX5APP20292 161 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 KITLGP21583 273 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 HCCSP53701 268 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ACTC1P68032 377 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ACTA1P68133 377 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF91Q05481 1191 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 CDK5R2Q13319 367 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 AVPI1Q5T686 147 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 TEX29Q8N6K0 151 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 OR2Z1Q8NG97 314 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ST7LQ8TDW4 575 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 APH1BQ8WW43 257 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 GTF3AQ92664 365 aaKnown RBP15.81■□□□□ 0.12
CCDC171-206ENST00000474193 MRPL48Q96GC5 212 aaKnown RBP15.81■□□□□ 0.12
CCDC171-206ENST00000474193 MROQ9BYG7 248 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 AMBNQ9NP70 447 aa15.81■□□□□ 0.12
CCDC171-206ENST00000474193 DDX28Q9NUL7 540 aaKnown RBP15.81■□□□□ 0.12
CCDC171-206ENST00000474193 ISPDA4D126 451 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 RNF212BA8MTL3 300 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 WBP4O75554 376 aaKnown RBP15.8■□□□□ 0.12
CCDC171-206ENST00000474193 APOL3O95236 402 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 MSMBP08118 114 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 PSKH1P11801 424 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 SELEP16581 610 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 MYF6P23409 242 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 SLC6A9P48067 706 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 CXCR4P61073 352 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 CSNK2BP67870 215 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 RAB40BQ12829 278 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 MALLQ13021 153 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 SCGB2A2Q13296 93 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 IL17RELQ6ZVW7 336 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 RNF133Q8WVZ7 376 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 TMEM186Q96B77 213 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 TBX5Q99593 518 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 KCNJ15Q99712 375 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 MDFIQ99750 246 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 ANKRD60Q9BZ19 345 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 SP140LQ9H930 580 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 PNRC2Q9NPJ4 139 aaKnown RBP15.8■□□□□ 0.12
CCDC171-206ENST00000474193 IL19Q9UHD0 177 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 IKZF2Q9UKS7 526 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 WIPI2Q9Y4P8 454 aa15.8■□□□□ 0.12
CCDC171-206ENST00000474193 TRAV20A0A0B4J274 112 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 DAPL1A0PJW8 107 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 M0R135 149 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 DBHP09172 617 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 SMN1Q16637 294 aaKnown RBP15.79■□□□□ 0.12
CCDC171-206ENST00000474193 LIPNQ5VXI9 398 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF322Q6U7Q0 402 aaPredicted RBP15.79■□□□□ 0.12
CCDC171-206ENST00000474193 FBXW12Q6X9E4 464 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF283Q8N7M2 679 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 OR10S1Q8NGN2 331 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 OR13G1Q8NGZ3 307 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 LGALS12Q96DT0 336 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF799Q96GE5 643 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 CNBD2Q96M20 576 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 GAL3ST1Q99999 423 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF665Q9H7R5 613 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 NIPAL2Q9H841 368 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 LPAR2Q9HBW0 351 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 HIF1ANQ9NWT6 349 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 PTTG3PQ9NZH4 202 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 PCDHB10Q9UN67 800 aa15.79■□□□□ 0.12
CCDC171-206ENST00000474193 EXOGQ9Y2C4 368 aaKnown RBP15.79■□□□□ 0.12
CCDC171-206ENST00000474193 IFNL4K9M1U5 179 aa15.78■□□□□ 0.12
CCDC171-206ENST00000474193 FAM20BO75063 409 aa15.78■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF254O75437 659 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms