RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KLF7O75840 302 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 STAMBPO95630 424 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 IFNA16P05015 189 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 RPA2P15927 270 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 FUT1P19526 365 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TCN2P20062 427 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ATP6V1C1P21283 382 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 NT5EP21589 574 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ACKR3P25106 362 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CRATP43155 626 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CDK9P50750 372 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 GZMMP51124 257 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SH3BGRP55822 239 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ATP5IP56385 69 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 MTPNP58546 118 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 RPS15P62841 145 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 KCNJ2P63252 427 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 LIPEQ05469 1076 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 FUT7Q11130 342 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 GNA13Q14344 377 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 NCF4Q15080 339 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF630Q2M218 657 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TRMT12Q53H54 448 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CMPK2Q5EBM0 449 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 AP1ARQ63HQ0 302 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ERICH5Q6P6B1 374 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 FAM199XQ6PEV8 388 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TMEM205Q6UW68 189 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TMEM107Q6UX40 140 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ANGPTL8Q6UXH0 198 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 NET1Q7Z628 596 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CALHM3Q86XJ0 350 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SLC30A8Q8IWU4 369 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 LRRC17Q8N6Y2 441 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CDRT4Q8N9R6 151 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR7G2Q8NG99 324 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR7G1Q8NGA0 311 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR13C2Q8NGS9 318 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR9A2Q8NGT5 310 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR2Y1Q8NGV0 311 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 OR10A6Q8NH74 314 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 PPWD1Q96BP3 646 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ASB9Q96DX5 294 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 AURKBQ96GD4 344 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TPD52L3Q96J77 140 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 KCTD14Q9BQ13 255 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SLC39A3Q9BRY0 314 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SIRPDQ9H106 197 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 LIME1Q9H400 295 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 TMEM38AQ9H6F2 299 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 GORASP2Q9H8Y8 452 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ADAP2Q9NPF8 381 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 PNO1Q9NRX1 252 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 DDX18Q9NVP1 670 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 GIN1Q9NXP7 522 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 MAT2BQ9NZL9 334 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CTSFQ9UBX1 484 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 C3orf18Q9UK00 162 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CFL2Q9Y281 166 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 FARSAQ9Y285 508 aaKnown RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SDK2Q58EX2 2172 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CFAP54Q96N23 3096 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SPTBN4Q9H254 2564 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 SPEGQ15772 3267 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 PCP4L1A6NKN8 68 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SRRM4A7MD48 611 aaKnown RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF724A8MTY0 619 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ANKRD65E5RJM6 399 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 H0YHG0 523 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 HMGN4O00479 90 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CCSO14618 274 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 RAD1O60671 282 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PSMG1O95456 288 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SYNGR4O95473 234 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 IFNA14P01570 189 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 IGKV3-11P04433 115 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 HMGN2P05204 90 aaKnown RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 GUSBP08236 651 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ALOX5P09917 674 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CT62P0C5K7 136 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ICAM2P13598 275 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 TCN1P20061 433 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PAICSP22234 425 aaKnown RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 MMP11P24347 488 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 MAP3K8P41279 467 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PPICP45877 212 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 EMDP50402 254 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 OR4D2P58180 307 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 DSTNP60981 165 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 PSPHP78330 225 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CDK6Q00534 326 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 DMTNQ08495 405 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 TMED1Q13445 227 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SELPLGQ14242 412 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNHIT3Q15649 155 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-202ENST00000471307 LTB4RQ15722 352 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF79Q15937 498 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 CYP51A1Q16850 503 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 SFT2D3Q587I9 215 aa3.93□□□□□ -1.78
CCDC39-202ENST00000471307 C1orf146Q5VVC0 180 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms