RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 IGHV2OR16-5A0A0B4J2B6 119 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 LOC107986453A0A1B0GWG9 222 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 A0A1B0GWJ7 208 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 C5orf49A4QMS7 147 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF879B4DU55 563 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 SLC22A1O15245 554 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 XRCC2O43543 280 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 AIREO43918 545 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 CLDN14O95500 239 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 FSTP19883 344 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 CD33P20138 364 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 HOXC12P31275 282 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 APLNRP35414 380 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 IDH3GP51553 393 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 NKX6-1P78426 367 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 GALK2Q01415 458 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 NAAAQ02083 359 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 TNK1Q13470 666 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 TBC1D28Q2M2D7 210 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ACSM3Q53FZ2 586 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ZBTB37Q5TC79 503 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 FBXW12Q6X9E4 464 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 DOK3Q7L591 496 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 LYPD6Q86Y78 171 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF676Q8N7Q3 588 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 OR14K1Q8NGZ2 314 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 OR10AC1Q8NH08 325 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 C12orf43Q96C57 262 aaKnown RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 MUCL1Q96DR8 90 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 COMMD4Q9H0A8 199 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 OR10A2Q9H208 303 aa7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF275Q9NSD4 429 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 RSL24D1Q9UHA3 163 aaKnown RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 DIDO1Q9BTC0 2240 aaKnown RBP7.04□□□□□ -1.28
NPHP3-204ENST00000469232 ANKHD1Q8IWZ3 2542 aaKnown RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 USP9XQ93008 2570 aaPredicted RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 hCG_38984A0A1B0GV85 526 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 ANKRD61A6NGH8 418 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 ZG16O60844 167 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 SMPD2O60906 423 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 AGFG2O95081 481 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 ATE1O95260 518 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 SLC2A1P11166 492 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF12P17014 697 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 IGFBP3P17936 291 aaPredicted RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 CFL1P23528 166 aaKnown RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 MAPK3P27361 379 aaPredicted RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
NPHP3-204ENST00000469232 PEX19P40855 299 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 TMEM42Q69YG0 159 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 FAM57BQ71RH2 274 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 ZNF101Q8IZC7 436 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 RDH10Q8IZV5 341 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 OR13C5Q8NGS8 318 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 OR51E1Q8TCB6 317 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 CA5BP1Q8WTZ4 195 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 TMEM203Q969S6 136 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 LRRC46Q96FV0 321 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 PGAM5Q96HS1 289 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 WFIKKN1Q96NZ8 548 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 KCNS3Q9BQ31 491 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 TMED9Q9BVK6 235 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 GPR84Q9NQS5 396 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 SSR3Q9UNL2 185 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 STARD10Q9Y365 291 aa7.03□□□□□ -1.28
NPHP3-204ENST00000469232 PNMA8CA0A1B0GUJ8 204 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 A0A1W2PR80 420 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 SHISA3A0PJX4 238 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 NKX2-6A6NCS4 301 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 P2RY10O00398 339 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 TMEM127O75204 238 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 DHRS3O75911 302 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 ARL6IP5O75915 188 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 NGFP01138 241 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 IL1AP01583 271 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 LCATP04180 440 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 ANXA2P07355 339 aaKnown RBP7.02□□□□□ -1.29
NPHP3-204ENST00000469232 PTAFRP25105 342 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 CD40P25942 277 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 CALCRP30988 508 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 MTNR1BP49286 362 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 UCP2P55851 309 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 NCS1P62166 190 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 FAM3AP98173 230 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 ZNF92Q03936 586 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 SRSF1Q07955 248 aaKnown RBP eCLIP7.02□□□□□ -1.29
NPHP3-204ENST00000469232 INSL4Q14641 139 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 SPCS2Q15005 226 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 CEP78Q5JTW2 689 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 GLYATL3Q5SZD4 288 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 RFPL4BQ6ZWI9 263 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 UTS2BQ765I0 119 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 CEACAM19Q7Z692 300 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 TPRA1Q86W33 373 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 NUP37Q8NFH4 326 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 OR51A4Q8NGJ6 313 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 OR5L1Q8NGL2 311 aa7.02□□□□□ -1.29
NPHP3-204ENST00000469232 DYNC2LI1Q8TCX1 351 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms