RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 GAB2Q9UQC2 676 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 KIAA1549LQ6ZVL6 1849 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 NPIPA5E9PKD4 350 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 BHLHE40O14503 412 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 SMPD2O60906 423 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 FHL5Q5TD97 284 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 WBP2NLQ6ICG8 309 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 SPICQ8N5J4 248 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 OR4K17Q8NGC6 315 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 ACKR4Q9NPB9 350 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 NPIPA1Q9UND3 350 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 A0A1B0GUH1 482 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 A0A1B0GX78 115 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 DPM1O60762 260 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 HOXB5P09067 269 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 HOXA5P20719 270 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 S1PR1P21453 382 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 ACKR3P25106 362 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 C2orf68Q2NKX9 166 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 PRAMEF8Q5VWM4 474 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 PRAMEF7Q5VXH5 474 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 OR2A2Q6IF42 318 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 PLPP7Q8NBV4 271 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 SLITRK2Q9H156 845 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 WDR13Q9H1Z4 485 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 FN3KRPQ9HA64 309 aa11.05□□□□□ -0.64
USP11-206ENST00000469080 PKDREJQ9NTG1 2253 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TMED7-TICAM2A0A0A6YYA0 188 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 IGHV3-9P01782 118 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SLC6A9P48067 706 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 H2BFSP57053 126 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SIRPAP78324 504 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 PLAURQ03405 335 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TLE3Q04726 772 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SPOCK1Q08629 439 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 AKR1C8PQ5T2L2 129 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 FAM69AQ5T7M9 428 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 DCAF12L2Q5VW00 463 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 RAET1LQ5VY80 246 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 NSUN5P2Q63ZY6 315 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SFXN4Q6P4A7 337 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 PPP1R3BQ86XI6 285 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SPEM1Q8N4L4 309 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 LGALS14Q8TCE9 139 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 PNPLA2Q96AD5 504 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 DDA1Q9BW61 102 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TMED7Q9Y3B3 224 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 ZNF337Q9Y3M9 751 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 DSPP15924 2871 aaKnown RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 TMIGD3P0DMS9 266 aaPredicted RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 GLB1P16278 677 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 CADP27708 2225 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 KIR3DL2P43630 455 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 FASLGP48023 281 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SLC37A1P57057 533 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 SRYQ05066 204 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 ESPL1Q14674 2120 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 GLDNQ6ZMI3 551 aaPredicted RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 OR51A4Q8NGJ6 313 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 ELOVL3Q9HB03 270 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TRDV1A0A1B0GX56 115 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TMEM129A0AVI4 362 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 PGCP20142 388 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 RBM34P42696 430 aaKnown RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 ZNF84P51523 738 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TMEM176BQ3YBM2 270 aaPredicted RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 PLXDC2Q6UX71 529 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 MAML2Q8IZL2 1156 aaPredicted RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 OR6V1Q8N148 313 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 ACBD4Q8NC06 268 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 RAB24Q969Q5 203 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 TMEM106AQ96A25 262 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 ADGRL4Q9HBW9 690 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 COA3Q9Y2R0 106 aaPredicted RBP11.04□□□□□ -0.64
USP11-206ENST00000469080 NPFFR2Q9Y5X5 522 aa11.04□□□□□ -0.64
USP11-206ENST00000469080 DOCK10Q96BY6 2186 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 A0A1W2PR77 199 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 ARRDC5A6NEK1 342 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 SC5DO75845 299 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 ACKR1Q16570 336 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 Q5PR19 223 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 BRIX1Q8TDN6 353 aaKnown RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 ZNF106Q9H2Y7 1883 aaKnown RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 DIDO1Q9BTC0 2240 aaKnown RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 IFITM10A6NMD0 228 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 ADAM10O14672 748 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 PPP1R2P9O14990 202 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 GIMD1P0DJR0 217 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 NME2P22392 152 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 ZNF85Q03923 595 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 MYO7BQ6PIF6 2116 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 FAM71CQ8NEG0 241 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 OR10G3Q8NGC4 313 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms