RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZFP3Q96NJ6 502 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 SERPINB11Q96P15 392 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 RBBP8Q99708 897 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 RARRES2Q99969 163 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 APOL2Q9BQE5 337 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 UTP23Q9BRU9 249 aaKnown RBP2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 RNF126Q9BV68 326 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 MAP1LC3CQ9BXW4 147 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 TRIM15Q9C019 465 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 ING2Q9H160 280 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 C1orf198Q9H425 327 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIR3DX1Q9H7L2 352 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 TRIM45Q9H8W5 580 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 FGF20Q9NP95 211 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 MCUBQ9NWR8 336 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 RMND1Q9NWS8 449 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 POFUT2Q9Y2G5 429 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 POLR3HQ9Y535 204 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 FLVCR1Q9Y5Y0 555 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 V9GYQ6 96 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 ADGRA3Q8IWK6 1321 aa2.9□□□□□ -1.95
HMGB1P25-201ENST00000468402 MIA3Q5JRA6 1907 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 KIAA1671Q9BY89 1806 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGKV1D-8A0A087WSZ0 117 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV1OR21-1A0A087WYE8 117 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMEM213A2RRL7 107 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 H3BN98 237 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 LAD1O00515 517 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 PLPP1O14494 284 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TOX3O15405 576 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 B4GALT5O43286 388 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 RBBP9O75884 186 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TNFAIP8O95379 198 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TSPAN13O95857 204 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 RNF224P0DH78 156 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 RD3LP0DJH9 198 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MLNP12872 115 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MGMTP16455 207 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TBPP20226 339 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MAGP20916 626 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 CXCR2P25025 360 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GDF1P27539 372 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 CSKP41240 450 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 YAP1P46937 504 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GCLMP48507 274 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 DNASE1L1P49184 302 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 AP3S2P59780 193 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GPX6P59796 221 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ATP6V0D1P61421 351 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GNG11P61952 73 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACTA2P62736 377 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACTG2P63267 376 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACTC1P68032 377 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ACTA1P68133 377 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TGFBR3Q03167 851 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 PPIDQ08752 370 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 SIGLEC14Q08ET2 396 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MED21Q13503 144 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMED2Q15363 201 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 PSMD5Q16401 504 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 LRRC36Q1X8D7 754 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GSG1Q2KHT4 349 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TIMM50Q3ZCQ8 353 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 AKIRIN2Q53H80 203 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2B11Q5JQS5 317 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MARC1Q5VT66 337 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 LPCAT4Q643R3 524 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ADNP2Q6IQ32 1131 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ANKRD26P1Q6NSI1 321 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAAP20Q6NZ36 180 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 CNIH2Q6PI25 160 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 WDR59Q6PJI9 974 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 WDR74Q6RFH5 385 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 USP50Q70EL3 339 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAM122BQ7Z309 247 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF329Q86UD4 541 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 NLRC5Q86WI3 1866 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 SKA3Q8IX90 412 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 PUSL1Q8N0Z8 303 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF786Q8N393 782 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 TMEM252Q8N6L7 170 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 WDSUB1Q8N9V3 476 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 CYB561A3Q8NBI2 242 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 NUBPLQ8TB37 319 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 AGAP11Q8TF27 550 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 GBF1Q92538 1859 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 NR4A3Q92570 626 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 OTUB2Q96DC9 234 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC25A38Q96DW6 304 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MBOAT7Q96N66 472 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR5B12Q96R08 314 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 KCNA7Q96RP8 456 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 HIST1H4GQ99525 98 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MICU1Q9BPX6 476 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZYG11BQ9C0D3 744 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 POLR2J2Q9GZM3 115 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 DERL2Q9GZP9 239 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 POLR2J3Q9H1A7 115 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 NTN4Q9HB63 628 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MRM3Q9HC36 420 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms