RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PIGUQ9H490 435 aa2.22□□□□□ -2.05
LRCH3-211ENST00000466054 ELOVL6Q9H5J4 265 aa2.22□□□□□ -2.05
LRCH3-211ENST00000466054 BEX1Q9HBH7 125 aa2.22□□□□□ -2.05
LRCH3-211ENST00000466054 RRAGDQ9NQL2 400 aaPredicted RBP2.22□□□□□ -2.05
LRCH3-211ENST00000466054 RGS18Q9NS28 235 aa2.22□□□□□ -2.05
LRCH3-211ENST00000466054 IGHV3-49A0A0A0MS15 119 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 GABRPO00591 440 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 CASQ2O14958 399 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-211ENST00000466054 ERI3O43414 337 aaKnown RBP2.21□□□□□ -2.06
LRCH3-211ENST00000466054 NMT2O60551 498 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 HMMRO75330 724 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 PGA4P0DJD7 388 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 PGA3P0DJD8 388 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 RNASE2P10153 161 aaKnown RBP2.21□□□□□ -2.06
LRCH3-211ENST00000466054 PCK1P35558 622 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 KDSRQ06136 332 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 CYP24A1Q07973 514 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 ITIH4Q14624 930 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 IGFBP7Q16270 282 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 ZNF829Q3KNS6 432 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-211ENST00000466054 GUSBP11Q6P575 273 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 WDR82Q6UXN9 313 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 MICU2Q8IYU8 434 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 VKORC1L1Q8N0U8 176 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 SLC35G3Q8N808 338 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 TMEM105Q8N8V8 129 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 TMEM243Q9BU79 118 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 FRMD8P1Q9BZ68 369 aaPredicted RBP2.21□□□□□ -2.06
LRCH3-211ENST00000466054 C21orf62Q9NYP8 219 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 HES2Q9Y543 173 aa2.21□□□□□ -2.06
LRCH3-211ENST00000466054 TSPOAP1O95153 1857 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 IGHV1-3A0A0C4DH29 117 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 A0A1W2PRD5 423 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 LGALS9O00182 355 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 BCKDKO14874 412 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 FCN3O75636 299 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 RAB5AP20339 215 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 POLR2IP36954 125 aaKnown RBP2.2□□□□□ -2.06
LRCH3-211ENST00000466054 PPICP45877 212 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 RAB7AP51149 207 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 RAD51Q06609 339 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 ILKQ13418 452 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 RWDD4Q6NW29 188 aaKnown RBP2.2□□□□□ -2.06
LRCH3-211ENST00000466054 CD300LGQ6UXG3 332 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 TMPRSS11AQ6ZMR5 421 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 MDP1Q86V88 176 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 ERO1BQ86YB8 467 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 COMMD1Q8N668 190 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 OR5T1Q8NG75 326 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 OR52E5Q8NH55 327 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 SGTBQ96EQ0 304 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 C9orf72Q96LT7 481 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 TEAD3Q99594 435 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 TEKT3Q9BXF9 490 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 ZSCAN16Q9H4T2 348 aaPredicted RBP2.2□□□□□ -2.06
LRCH3-211ENST00000466054 TBC1D24Q9ULP9 559 aa2.2□□□□□ -2.06
LRCH3-211ENST00000466054 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 LRRIQ4A6NIV6 560 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 ANKRD65E5RJM6 399 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 XRCC2O43543 280 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 GATBO75879 557 aaKnown RBP2.19□□□□□ -2.06
LRCH3-211ENST00000466054 MT-ND4P03905 459 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 IFNW1P05000 195 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 TACSTD2P09758 323 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 CD70P32970 193 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 MYCNOSP40205 109 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 CCNG1P51959 295 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 UBE2E1P51965 193 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 NDUFA8P51970 172 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 CLDN18P56856 261 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 IFITM3Q01628 133 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 FUT5Q11128 374 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 TFDP2Q14188 446 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 SPINT4Q6UDR6 99 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 ZNF101Q8IZC7 436 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 OFCC1Q8IZS5 231 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 PHF10Q8WUB8 498 aaKnown RBP2.19□□□□□ -2.06
LRCH3-211ENST00000466054 RAB1CQ92928 201 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 IP6K3Q96PC2 410 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 ZNF442Q9H7R0 627 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 LYRM4Q9HD34 91 aa2.19□□□□□ -2.06
LRCH3-211ENST00000466054 IGKV1-27A0A075B6S5 117 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 TRAV25A0A0B4J276 109 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 SERTM2A0A1B0GWG4 89 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 BTNL10A8MVZ5 291 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 K7EM74 188 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 SLC16A7O60669 478 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 DNAJB6O75190 326 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 CTAG2O75638 210 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 UBCP0CG48 685 aaKnown RBP2.18□□□□□ -2.06
LRCH3-211ENST00000466054 OR8G3PP0DMU2 310 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 NBL1P41271 181 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 SLC1A2P43004 574 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 UBE2MP61081 183 aaKnown RBP2.18□□□□□ -2.06
LRCH3-211ENST00000466054 RPS15AP62244 130 aaKnown RBP2.18□□□□□ -2.06
LRCH3-211ENST00000466054 SLC39A6Q13433 755 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 SLC25A35Q3KQZ1 300 aa2.18□□□□□ -2.06
LRCH3-211ENST00000466054 UNC93AQ86WB7 457 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms