RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SLC7A2P52569 658 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ATP1B3P54709 279 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 FOXA1P55317 472 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 RAG2P55895 527 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 RAB38P57729 211 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR4D2P58180 307 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 STXBP1P61764 594 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 ZNF33BQ06732 778 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CRMP1Q14194 572 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 AANATQ16613 207 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ZNF678Q5SXM1 525 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 AGAP7PQ5VUJ5 663 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 KHDRBS2Q5VWX1 349 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 SLC25A25Q6KCM7 469 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 TRIM40Q6P9F5 258 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 UQCC3Q6UW78 93 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 SCIMPQ6UWF3 145 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ZNF562Q6V9R5 426 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 NET1Q7Z628 596 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 DHDDSQ86SQ9 333 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CRLF3Q8IUI8 442 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 LINC00518Q8N0U6 118 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 C4orf33Q8N1A6 199 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 GABRG1Q8N1C3 465 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CLEC4FQ8N1N0 589 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ZADH2Q8N4Q0 377 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ACOT4Q8N9L9 421 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 APCDD1LQ8NCL9 501 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 TTLQ8NG68 377 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR7A2PQ8NGA2 310 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR4F6Q8NGB9 312 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR1J1Q8NGS3 322 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR2T11Q8NH01 316 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR52N5Q8NH56 324 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 OR1F12Q8NHA8 337 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CD300LFQ8TDQ1 290 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 AENQ8WTP8 325 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 HPSE2Q8WWQ2 592 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 RAB1CQ92928 201 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 PNPLA2Q96AD5 504 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CIDECQ96AQ7 238 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 PPWD1Q96BP3 646 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 UPRTQ96BW1 309 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 AGAP4Q96P64 663 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 SIGLEC12Q96PQ1 595 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 MRPL57Q9BQC6 102 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 CLEC7AQ9BXN2 247 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 SHCBP1LQ9BZQ2 653 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ROGDIQ9GZN7 287 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ILKAPQ9H0C8 392 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 S100A14Q9HCY8 104 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 PRTFDC1Q9NRG1 225 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 SDR39U1Q9NRG7 319 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 TEX10Q9NXF1 929 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 STMN3Q9NZ72 180 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 MTCH1Q9NZJ7 389 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 CD300AQ9UGN4 299 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 SLC7A8Q9UHI5 535 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 ASB4Q9Y574 426 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 TIMM22Q9Y584 194 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 PTPN13Q12923 2485 aa3.45□□□□□ -1.86
UBR4-209ENST00000465036 RP1L1Q8IWN7 2480 aaPredicted RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 ASH1LQ9NR48 2969 aaKnown RBP3.45□□□□□ -1.86
UBR4-209ENST00000465036 CPAMD8Q8IZJ3 1885 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 A0A0A6YYD5 115 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 TRBV11-1A0A0K0K1C0 115 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 PDLIM1O00151 329 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 MANBAO00462 879 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 RS1O15537 224 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 PLIN3O60664 434 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CTNSO60931 367 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SPAG7O75391 227 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SUPT7LO94864 414 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 OR2F2O95006 317 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SCELO95171 688 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CLDN9O95484 217 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 DUS4LO95620 317 aaKnown RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 AIFM1O95831 613 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 OPN1LWP04000 364 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CLPSP04118 112 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 IFNA16P05015 189 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 KLK1P06870 262 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 UQCRHP07919 91 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 PRPS2P11908 318 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 TBXA2RP21731 343 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 OTX1P32242 354 aaPredicted RBP3.44□□□□□ -1.86
UBR4-209ENST00000465036 CCNG1P51959 295 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CDH11P55287 796 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 CTAG1AP78358 180 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 ARG2P78540 354 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 MS4A2Q01362 244 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 HMGCS1Q01581 520 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 EWSR1Q01844 656 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBR4-209ENST00000465036 LGALS3BPQ08380 585 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 SLAMF1Q13291 335 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 GK3PQ14409 553 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 C3AR1Q16581 482 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 BEX5Q5H9J7 111 aa3.44□□□□□ -1.86
UBR4-209ENST00000465036 PAGE2BQ5JRK9 111 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms