RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TEX12Q9BXU0 123 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 BARHL1Q9BZE3 327 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 SHARPINQ9H0F6 387 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 PPIL3Q9H2H8 161 aaKnown RBP9.63□□□□□ -0.87
APTX-209ENST00000460940 C1orf198Q9H425 327 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 EMC7Q9NPA0 242 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
APTX-209ENST00000460940 CADP27708 2225 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 CCDC168Q8NDH2 2452 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SHISA9B4DS77 424 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 CRYAAP02489 173 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 IGFBP1P08833 259 aaPredicted RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 ZNF3P17036 446 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 LAP3P28838 519 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 CDAP32320 146 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 GIPRP48546 466 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 IDH3GP51553 393 aaPredicted RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 CDH11P55287 796 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 RAB1AP62820 205 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SGCAQ16586 387 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SLC22A25Q6T423 547 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 OVCH2Q7RTZ1 564 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SYT9Q86SS6 491 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 NPEPL1Q8NDH3 523 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SDR9C7Q8NEX9 313 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SEC61A2Q9H9S3 476 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 NOX3Q9HBY0 568 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 SLC25A19Q9HC21 320 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 CMC2Q9NRP2 79 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 MCUBQ9NWR8 336 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 KIF25Q9UIL4 384 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 PLCE1Q9P212 2302 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 TRAV6A0A075B6T7 132 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 IGLV1-36A0A0B4J1U3 117 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 ZNF670-ZNF695F2Z2N8 137 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 MMP7P09237 267 aaPredicted RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 ARSBP15848 533 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 ZNF14P17017 642 aaPredicted RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 POU1F1P28069 291 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 LSM6P62312 80 aaKnown RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 POLR2GP62487 172 aaKnown RBP eCLIP9.62□□□□□ -0.87
APTX-209ENST00000460940 NAAAQ02083 359 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 GLO1Q04760 184 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 PHC2Q8IXK0 858 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 ZNF611Q8N823 705 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 OR2T4Q8NH00 348 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 ZNF431Q8TF32 576 aaPredicted RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 CNOT2Q9NZN8 540 aaKnown RBP9.62□□□□□ -0.87
APTX-209ENST00000460940 B9D1Q9UPM9 204 aa9.62□□□□□ -0.87
APTX-209ENST00000460940 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 GPX5O75715 221 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 PLAUP00749 431 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 SERPINA5P05154 406 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 GAAP10253 952 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 HOXA1P49639 335 aaPredicted RBP9.61□□□□□ -0.87
APTX-209ENST00000460940 SLC25A1P53007 311 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 BPIFB3P59826 476 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 RAB14P61106 215 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 PLP2Q04941 152 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 SPOCK1Q08629 439 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 GINS1Q14691 196 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 KCNMB1Q16558 191 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 TSTQ16762 297 aaKnown RBP9.61□□□□□ -0.87
APTX-209ENST00000460940 METAP1DQ6UB28 335 aaPredicted RBP9.61□□□□□ -0.87
APTX-209ENST00000460940 OR6V1Q8N148 313 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 LRRC18Q8N456 261 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 IQCF1Q8N6M8 205 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 SLC37A3Q8NCC5 494 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 OR4F15Q8NGB8 312 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 CREB3L1Q96BA8 519 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 ZNF75AQ96N20 296 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 DDOQ99489 341 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 MGLLQ99685 303 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 ZNF416Q9BWM5 594 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 RERGLQ9H628 205 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 ST6GALNAC2Q9UJ37 374 aa9.61□□□□□ -0.87
APTX-209ENST00000460940 COA3Q9Y2R0 106 aaPredicted RBP9.61□□□□□ -0.87
APTX-209ENST00000460940 IGHV2OR16-5A0A0B4J2B6 119 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 hCG_1807616A0A1W2PRN6 198 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 FABP12A6NFH5 140 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 TSC22D2O75157 780 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 CELA3BP08861 270 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 PAICSP22234 425 aaKnown RBP9.6□□□□□ -0.87
APTX-209ENST00000460940 DNASE1P24855 282 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 EPHA2P29317 976 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 RPS19P39019 145 aaKnown RBP9.6□□□□□ -0.87
APTX-209ENST00000460940 CRISP1P54107 249 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 HSF2Q03933 536 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 CRMP1Q14194 572 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 ENDOGQ14249 297 aaKnown RBP9.6□□□□□ -0.87
APTX-209ENST00000460940 ETFDHQ16134 617 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 SSX1Q16384 188 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 CFAP77Q6ZQR2 320 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 FGFBP3Q8TAT2 258 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 FBXO17Q96EF6 278 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 TSSK2Q96PF2 358 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms