RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 APOBEC3BQ9UH17 382 aaKnown RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 GNPTGQ9UJJ9 305 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 GOLT1BQ9Y3E0 138 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CROCCQ5TZA2 2017 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 SCN4AP35499 1836 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ZNF816-ZNF321PA0A0X1KG74 233 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SMIM31A0A1B0GVY4 71 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 A0A1B0GW15 77 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 A0A1W2PQ72 361 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 PSMB11A5LHX3 300 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 LYRM9A8MSI8 78 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 H7C0C1 242 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 AGPAT2O15120 278 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 GYG2O15488 501 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 HCRTR1O43613 425 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 CALUO43852 315 aaPredicted RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 PFDN1O60925 122 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 MPDU1O75352 247 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SPAG7O75391 227 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 EIF3GO75821 320 aaKnown RBP eCLIP2.21□□□□□ -2.05
HPS3-203ENST00000460822 TDP2O95551 362 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 LSM8O95777 96 aaKnown RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 OXTP01178 125 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SEMG1P04279 462 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ZNF250P15622 560 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ZP3P21754 424 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 IVDP26440 423 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 HTR2CP28335 458 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DS4P43632 304 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 VDAC2P45880 294 aaPredicted RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 CCR8P51685 355 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 RAP1GDS1P52306 607 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SLC18A1P54219 525 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 STXBP1P61764 594 aaKnown RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 SKP1P63208 163 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 CSNK1G2P78368 415 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 TGFBR3Q03167 851 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SLC1A5Q15758 541 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 UTF1Q5T230 341 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 OLFML2AQ68BL7 652 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ZNF470Q6ECI4 717 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 IZUMO2Q6UXV1 221 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 TFAP2EQ6VUC0 442 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 TMPRSS11AQ6ZMR5 421 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 PRSS41Q7RTY9 318 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 FAM220AQ7Z4H9 259 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SLC13A5Q86YT5 568 aaPredicted RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 KRTAP7-1Q8IUC3 87 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 LINC00469Q8N7U9 141 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 OR10G3Q8NGC4 313 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 OR51F2Q8NH61 342 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 FANK1Q8TC84 345 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ACER1Q8TDN7 264 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 NDRG1Q92597 394 aaKnown RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 FGF14Q92915 247 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SLC35B4Q969S0 331 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 PPP1R14BQ96C90 147 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 SNF8Q96H20 258 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 C1orf147Q96MC9 270 aaPredicted RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 CNPY3Q9BT09 278 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 NDEL1Q9GZM8 345 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 LRRC19Q9H756 370 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 PTGES2Q9H7Z7 377 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 CD209Q9NNX6 404 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 MS4A12Q9NXJ0 267 aa2.21□□□□□ -2.05
HPS3-203ENST00000460822 ZNF256Q9Y2P7 627 aaPredicted RBP2.21□□□□□ -2.05
HPS3-203ENST00000460822 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.21□□□□□ -2.05
HPS3-203ENST00000460822 ABCA3Q99758 1704 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 FER1L6Q2WGJ9 1857 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 ASTN1O14525 1302 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 IGKV3D-20A0A0C4DH25 116 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 ERVV-1B6SEH8 477 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 NIPSNAP2O75323 286 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 FKBP6O75344 327 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 IGHV3-48P01763 117 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 FOLR1P15328 257 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 PSMC3P17980 439 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 BGNP21810 368 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 RPA3P35244 121 aaPredicted RBP2.21□□□□□ -2.06
HPS3-203ENST00000460822 GLP1RP43220 463 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 CLDN6P56747 220 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 SLC25A11Q02978 314 aaKnown RBP2.21□□□□□ -2.06
HPS3-203ENST00000460822 CAV1Q03135 178 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 ZNF92Q03936 586 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 ZNF763Q0D2J5 394 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 EGFEM1PQ0D2K5 195 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 FCN2Q15485 313 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 ATP6AP1Q15904 470 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 TNXAQ16473 311 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 Q1RN00 199 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 PRR30Q53SZ7 412 aaPredicted RBP2.21□□□□□ -2.06
HPS3-203ENST00000460822 C1orf100Q5SVJ3 147 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 C1orf146Q5VVC0 180 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 CNIH2Q6PI25 160 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 CDC20BQ86Y33 519 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 C4orf33Q8N1A6 199 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 C17orf78Q8N4C9 275 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 NOXO1Q8NFA2 376 aa2.21□□□□□ -2.06
HPS3-203ENST00000460822 OR51S1Q8NGJ8 323 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms