RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 DFFBO76075 338 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 AADACP22760 399 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 PTGER4P35408 488 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 DSCR4P56555 118 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-205ENST00000460170 CLDN15P56746 228 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 AKR1C1Q04828 323 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-205ENST00000460170 DMRTC1Q5HYR2 192 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 RBMS3Q6XE24 437 aaKnown RBP13.26□□□□□ -0.29
PTPRU-205ENST00000460170 CDH26Q8IXH8 852 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ARRDC1Q8N5I2 433 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 OR51H1Q8NH63 302 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 SLC39A9Q9NUM3 307 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 FAM221AA4D161 298 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 NUDT19A8MXV4 375 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 HS3ST1O14792 307 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 B4GALT1P15291 398 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF610Q8N9Z0 462 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 ST6GAL2Q96JF0 529 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 SLC23A1Q9UHI7 598 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 LOXL2Q9Y4K0 774 aa13.26□□□□□ -0.29
PTPRU-205ENST00000460170 OR6C6A6NF89 314 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 GRPP07492 148 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 CTLA4P16410 223 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 PEBP1P30086 187 aaKnown RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 OR10G3Q8NGC4 313 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 RAB39BQ96DA2 213 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 MENTQ9BUN1 341 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 MRPS18AQ9NVS2 196 aaKnown RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 SPINT1O43278 529 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 GCM2O75603 506 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 NXPH1P58417 271 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 CD226Q15762 336 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 RTL8AQ9BWD3 113 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 SMCO4Q9NRQ5 59 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 CEP290O15078 2479 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 A0A096LPE4 126 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 SERPINE3A8MV23 424 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 GMDSO60547 372 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 CTAG2O75638 210 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 FCGR2CP31995 323 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 THBS4P35443 961 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 CCL11P51671 97 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 AVPI1Q5T686 147 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 NPEPL1Q8NDH3 523 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 C2orf50Q96LR7 162 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 QPCTLQ9NXS2 382 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 MRM2Q9UI43 246 aaKnown RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 KLF13Q9Y2Y9 288 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 C5orf49A4QMS7 147 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 TMEM128Q5BJH2 165 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 GUSBP11Q6P575 273 aa13.25□□□□□ -0.29
PTPRU-205ENST00000460170 PARP12Q9H0J9 701 aaKnown RBP13.25□□□□□ -0.29
PTPRU-205ENST00000460170 SCGB2A1O75556 95 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 RPA2P15927 270 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ATG4DQ86TL0 474 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 OR2G3Q8NGZ4 309 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 MSI2Q96DH6 328 aaKnown RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 IP6K3Q96PC2 410 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 TMEM272A0A1B0GTI8 110 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 TXNL1O43396 289 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 NXPH3O95157 252 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 BCKDHBP21953 392 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ARR3P36575 388 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 C17orf107Q6ZR85 190 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 LFNGQ8NES3 379 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ST7LQ8TDW4 575 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 PLPP3O14495 311 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 EPPINO95925 133 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 SEMG1P04279 462 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ADRB1P08588 477 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 IFITM3Q01628 133 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 PLGLAQ15195 96 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 OR52W1Q6IF63 320 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF770Q6IQ21 691 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ANKRD37Q7Z713 158 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 OR11L1Q8NGX0 322 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 NIPSNAP3BQ9BS92 247 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 SH3BGRL2Q9UJC5 107 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ICAM5Q9UMF0 924 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 RFPL4AA6NLU0 287 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 C17orf112F2Z3M2 114 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 RFPL4AL1F8VTS6 287 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 HPNP05981 417 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ERGP11308 486 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ADRA2CP18825 462 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 SLC10A1Q14973 349 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 CLLU1Q5K131 121 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 C16orf47Q6ZP98 133 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms