RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 LMO4P61968 165 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 MUC20Q8N307 709 aaPredicted RBP19.58■□□□□ 0.72
CBX3-204ENST00000456948 TEX29Q8N6K0 151 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 SPSB4Q96A44 273 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 REEP6Q96HR9 211 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 PKP2Q99959 881 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 SOX7Q9BT81 388 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 GABARAPL3Q9BY60 117 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 BRD7Q9NPI1 651 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 ZNF391Q9UJN7 358 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 ABCA2Q9BZC7 2435 aa19.58■□□□□ 0.72
CBX3-204ENST00000456948 TRAV20A0A0B4J274 112 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 A0A1B0GWJ7 208 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 F5H5P2 479 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 WNT9BO14905 357 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 ZNF254O75437 659 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 HLA-DPB1P04440 258 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 FAM157CP0CG43 387 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 CA6P23280 308 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 BTG1P62324 171 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 FAM120AOSQ5T036 256 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 PLPP7Q8NBV4 271 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 OR8J1Q8NGP2 316 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 TMEM186Q96B77 213 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 IL4I1Q96RQ9 567 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 AMELYQ99218 206 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 UBAP1Q9NZ09 502 aa19.57■□□□□ 0.72
CBX3-204ENST00000456948 TANC2Q9HCD6 1990 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 ACOD1A6NK06 481 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 KIAA1324LA8MWY0 1029 aaPredicted RBP19.56■□□□□ 0.72
CBX3-204ENST00000456948 H0YL77 283 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 MLNRO43193 412 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 MRPL3P09001 348 aaKnown RBP19.56■□□□□ 0.72
CBX3-204ENST00000456948 CPT2P23786 658 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 EPHA2P29317 976 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 CD200P41217 278 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 GATA4P43694 442 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 POU4F2Q12837 409 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 ZNF181Q2M3W8 571 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 CR1LQ2VPA4 569 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 TMEM155Q4W5P6 130 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 SPRNQ5BIV9 151 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 CSNK2A3Q8NEV1 391 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 TRUB1Q8WWH5 349 aaKnown RBP19.56■□□□□ 0.72
CBX3-204ENST00000456948 STMN2Q93045 179 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 RFKQ969G6 155 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 ITFG2Q969R8 447 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 SGK3Q96BR1 496 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 ADAT1Q9BUB4 502 aaKnown RBP19.56■□□□□ 0.72
CBX3-204ENST00000456948 C9orf16Q9BUW7 83 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 FN3KRPQ9HA64 309 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 C14orf119Q9NWQ9 140 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 IMPAD1Q9NX62 359 aa19.56■□□□□ 0.72
CBX3-204ENST00000456948 WARS2Q9UGM6 360 aaKnown RBP19.56■□□□□ 0.72
CBX3-204ENST00000456948 CCDC182A6NF36 153 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 H3BNX3 289 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 TMEM178BH3BS89 294 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 IGHV2-5P01817 119 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 SRD5A1P18405 259 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 MDH2P40926 338 aaKnown RBP19.55■□□□□ 0.72
CBX3-204ENST00000456948 ALDH3A2P51648 485 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 PRSS12P56730 875 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 EFNB1P98172 346 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 GFOD2Q3B7J2 385 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 AADACL4Q5VUY2 407 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 LRRN1Q6UXK5 716 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 MOGAT3Q86VF5 341 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 LRRC28Q86X40 367 aaPredicted RBP19.55■□□□□ 0.72
CBX3-204ENST00000456948 OR56B2PQ8NGI1 322 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 OR8S1Q8NH09 359 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 S100A14Q9HCY8 104 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 HIF1ANQ9NWT6 349 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 HAO2Q9NYQ3 351 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 USE1Q9NZ43 259 aa19.55■□□□□ 0.72
CBX3-204ENST00000456948 FAM157AC9JC47 383 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 IGHV2-70P01814 119 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 ALPLP05186 524 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 DCTDP32321 178 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 ATP6V1E1P36543 226 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 GNALP38405 381 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 MMP16P51512 607 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 RIDAP52758 137 aaKnown RBP19.54■□□□□ 0.72
CBX3-204ENST00000456948 PSMA6P60900 246 aaKnown RBP19.54■□□□□ 0.72
CBX3-204ENST00000456948 FAM3AP98173 230 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 TMED1Q13445 227 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 ZNF679Q8IYX0 411 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 LPAR2Q9HBW0 351 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 ABCB9Q9NP78 766 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 IKZF2Q9UKS7 526 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 LRP12Q9Y561 859 aa19.54■□□□□ 0.72
CBX3-204ENST00000456948 TMEM269A0A1B0GVZ9 245 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 SNTNA6NMZ2 147 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 ZNF670-ZNF695F2Z2N8 137 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 FOXH1O75593 365 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 SRP14P37108 136 aaKnown RBP19.53■□□□□ 0.72
CBX3-204ENST00000456948 HCCSP53701 268 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 ROM1Q03395 351 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 SCGB2A2Q13296 93 aa19.53■□□□□ 0.72
CBX3-204ENST00000456948 ZNF829Q3KNS6 432 aaPredicted RBP19.53■□□□□ 0.72
CBX3-204ENST00000456948 PRSS45Q7RTY3 260 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms