RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 LPAR6P43657 344 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 S100A12P80511 92 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 IL34Q6ZMJ4 242 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 C19orf47Q8N9M1 422 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 TCEAL7Q9BRU2 100 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 SLC17A5Q9NRA2 495 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 PARPBPQ9NWS1 579 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 GDE1Q9NZC3 331 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 HLA-DOBP13765 273 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 LBX1P52954 281 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 ZNF117Q03924 483 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 EMC4Q5J8M3 183 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 ZDHHC22Q8N966 263 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SPSB2Q99619 263 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 RPP25Q9BUL9 199 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 KCNIP3Q9Y2W7 256 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 KPTNQ9Y664 436 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 LOC101059948A0A1B0GTJ6 334 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 S100PP25815 95 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 BIDP55957 195 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SCAND1P57086 179 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 NKAIN3Q8N8D7 197 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 OR14K1Q8NGZ2 314 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 OR8U1Q8NH10 309 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 TGIF2Q9GZN2 237 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 FAM212BQ9NTI7 297 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 C7orf77A4D0Y5 90 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 H0YIG0 161 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SPIN3Q5JUX0 258 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 DHRS7BQ6IAN0 325 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 C16orf47Q6ZP98 133 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 CPEB2Q7Z5Q1 589 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SUMF1Q8NBK3 374 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 ARHGAP5-AS1Q96IT6 56 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 NAA11Q9BSU3 229 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 PLEKHJ1Q9NW61 149 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 KLRF1Q9NZS2 232 aa12.39□□□□□ -0.43
UBE2D3-210ENST00000453744 SHISA8B8ZZ34 492 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 WRBO00258 174 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SLC6A8P48029 635 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 INSM1Q01101 510 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TOMM20Q15388 145 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 MICBQ29980 383 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 ACTBL2Q562R1 376 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TMEM196Q5HYL7 178 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 RTN4RL2Q86UN3 420 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TM4SF19Q96DZ7 209 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 IGHV3-20A0A0C4DH32 117 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 C1QL1O75973 258 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SMIM10L1P0DMW3 83 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TMEM225BP0DP42 221 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SFTPDP35247 375 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 PPICP45877 212 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 EGR4Q05215 589 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 PHLDA2Q53GA4 152 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SMIM10Q96HG1 83 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 LUZP4Q9P127 313 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 CEP250Q9BV73 2442 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 SDK2Q58EX2 2172 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 RAB27BO00194 218 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 EIF4E2O60573 245 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 POLR2GP62487 172 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 BADQ92934 168 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 IP6K3Q96PC2 410 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 TXNIPQ9H3M7 391 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 COA4Q9NYJ1 87 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
UBE2D3-210ENST00000453744 FAM221AA4D161 298 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 ZNF726A6NNF4 738 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 TXNDC12O95881 172 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 RHEBQ15382 184 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 BATF2Q8N1L9 274 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 PIGTQ969N2 578 aa12.37□□□□□ -0.43
UBE2D3-210ENST00000453744 OR10C1Q96KK4 312 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms