RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SPCS2Q15005 226 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 GLYATL3Q5SZD4 288 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 UNQ6126/PRO20091Q6UXV3 157 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 USP43Q70EL4 1123 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 PARP16Q8N5Y8 322 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 KBTBD8Q8NFY9 601 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 OR5L1Q8NGL2 311 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 OR14K1Q8NGZ2 314 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 AKAP1Q92667 903 aaKnown RBP eCLIP16.64■□□□□ 0.25
RPS28-202ENST00000449223 REEP6Q96HR9 211 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 WFIKKN1Q96NZ8 548 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 MED18Q9BUE0 208 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 REPIN1Q9BWE0 567 aaKnown RBP16.64■□□□□ 0.25
RPS28-202ENST00000449223 EIF3KQ9UBQ5 218 aaKnown RBP16.64■□□□□ 0.25
RPS28-202ENST00000449223 DHDHQ9UQ10 334 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 N6AMT1Q9Y5N5 214 aa16.64■□□□□ 0.25
RPS28-202ENST00000449223 TRAV1-2A0A0B4J238 106 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 hCG_38984A0A1B0GV85 526 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 MTRF1O75570 445 aaKnown RBP16.63■□□□□ 0.25
RPS28-202ENST00000449223 NGFP01138 241 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 FSTP19883 344 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 ZNF83P51522 516 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 UCP2P55851 309 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 SPTBN1Q01082 2364 aaKnown RBP16.63■□□□□ 0.25
RPS28-202ENST00000449223 ZNF92Q03936 586 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 OR8B8Q15620 311 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 RFPL4BQ6ZWI9 263 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 KRT74Q7RTS7 529 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 TSEN15Q8WW01 171 aaKnown RBP16.63■□□□□ 0.25
RPS28-202ENST00000449223 NOX4Q9NPH5 578 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 NDRG3Q9UGV2 375 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 STARD10Q9Y365 291 aa16.63■□□□□ 0.25
RPS28-202ENST00000449223 WIPF3A6NGB9 483 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 IL1AP01583 271 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 PTAFRP25105 342 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 CALRP27797 417 aaKnown RBP16.62■□□□□ 0.25
RPS28-202ENST00000449223 GRNP28799 593 aaKnown RBP16.62■□□□□ 0.25
RPS28-202ENST00000449223 CALCRP30988 508 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 TGFBR1P36897 503 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 MAGEB1P43366 347 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 MTNR1BP49286 362 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 MALLQ13021 153 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 HSD17B12Q53GQ0 312 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 FAM27D1Q5T7N8 215 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 TMEM108Q6UXF1 575 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 FBXW12Q6X9E4 464 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 OR13C3Q8NGS6 347 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 OR2AE1Q8NHA4 323 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 NDNFQ8TB73 568 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 SOX7Q9BT81 388 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 BCL2L14Q9BZR8 327 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 NGBQ9NPG2 151 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 DOPEY1Q5JWR5 2465 aa16.62■□□□□ 0.25
RPS28-202ENST00000449223 HEATR1Q9H583 2144 aaKnown RBP16.62■□□□□ 0.25
RPS28-202ENST00000449223 SHISA3A0PJX4 238 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 M0R1B8 84 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 CD40P25942 277 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 PEX19P40855 299 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 RAD52P43351 418 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 SOX2P48431 317 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 FAM3AP98173 230 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 GK2Q14410 553 aaPredicted RBP16.61■□□□□ 0.25
RPS28-202ENST00000449223 ASPHD2Q6ICH7 369 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 COMMD2Q86X83 199 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 DCSTAMPQ9H295 470 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 FOXJ3Q9UPW0 622 aa16.61■□□□□ 0.25
RPS28-202ENST00000449223 CRYAAP02489 173 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 IGFBP3P17936 291 aaPredicted RBP16.6■□□□□ 0.25
RPS28-202ENST00000449223 SRMP19623 302 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 TNK1Q13470 666 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 CNPY1Q3B7I2 92 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 GFOD2Q3B7J2 385 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 ZBTB37Q5TC79 503 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 ZNF529Q6P280 563 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 TPRA1Q86W33 373 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 DYNC2LI1Q8TCX1 351 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 FAM71F1Q96KD3 344 aaPredicted RBP16.6■□□□□ 0.25
RPS28-202ENST00000449223 DACH2Q96NX9 599 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 NPDC1Q9NQX5 325 aaPredicted RBP16.6■□□□□ 0.25
RPS28-202ENST00000449223 USP9XQ93008 2570 aaPredicted RBP16.6■□□□□ 0.25
RPS28-202ENST00000449223 A0A1W2PPW3 197 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 MYL9P24844 172 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 SDC2P34741 201 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 GSK3AP49840 483 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 PPP1CBP62140 327 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 SERPINA12Q8IW75 414 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 PP6455Q8WZ26 134 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 ADAT3Q96EY9 351 aaPredicted RBP16.6■□□□□ 0.25
RPS28-202ENST00000449223 SNTG1Q9NSN8 517 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 CADP27708 2225 aa16.6■□□□□ 0.25
RPS28-202ENST00000449223 H3BSH0 61 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 LMX1BO60663 402 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 ACKR3P25106 362 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 MAP2K3P46734 347 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 SERPINB10P48595 397 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 NKX6-1P78426 367 aaPredicted RBP16.59■□□□□ 0.25
RPS28-202ENST00000449223 PGAP1Q75T13 922 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 WFDC8Q8IUA0 241 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 SEMA6DQ8NFY4 1073 aa16.59■□□□□ 0.25
RPS28-202ENST00000449223 FGGYQ96C11 551 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms