RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SNTG1Q9NSN8 517 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC2A8Q9NY64 477 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 PRDM4Q9UKN5 801 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ASB1Q9Y576 335 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 HILPDAQ9Y5L2 63 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 TLN1Q9Y490 2541 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF593O00488 134 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 TBX19O60806 448 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 LILRA1O75019 489 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 MYF6P23409 242 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 MAGEA12P43365 314 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 MVDP53602 400 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 MTCP1P56278 107 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 APOFQ13790 326 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 NPSR1Q6W5P4 371 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 AHSA2Q719I0 299 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 CPOQ8IVL8 374 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 SGPP2Q8IWX5 399 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF709Q8N972 641 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR5D14Q8NGL3 314 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 AP3S1Q92572 193 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ASB9Q96DX5 294 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 FYTTD1Q96QD9 318 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF350Q9GZX5 532 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 RIMS4Q9H426 269 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 SMPD3Q9NY59 655 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 TAS2R1Q9NYW7 299 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 COA3Q9Y2R0 106 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 PRELID3BQ9Y3B1 194 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 JMJD1CQ15652 2540 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 B4DXG7 233 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 INAFM1C9JVW0 142 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR7C1O76099 320 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAUP35544 74 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 RPL13AP40429 203 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 AKR1C2P52895 323 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ERVFRD-1P60508 538 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZP4Q12836 540 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 TIMM23BQ5SRD1 257 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 LAMTOR1Q6IAA8 161 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 MRM1Q6IN84 353 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ELMOD2Q8IZ81 293 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 ADAMTS17Q8TE56 1095 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM230Q96A57 120 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 Q96M85 177 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 NUAK2Q9H093 628 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 COA4Q9NYJ1 87 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 SCN8AQ9UQD0 1980 aa4.98□□□□□ -1.61
CDC42BPA-209ENST00000448940 GUSBP08236 651 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 NUDT7P0C024 238 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANXA7P20073 488 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 GNG10P50151 68 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 RTL8BQ17RB0 113 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PAN3Q58A45 887 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF573Q86YE8 665 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF764Q96H86 408 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CIB1Q99828 191 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 NELFAQ9H3P2 528 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CGGBP1Q9UFW8 167 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRAV20A0A0B4J274 112 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 IGHV1-69-2A0A0G2JMI3 117 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ATP6V1G2-DDX39BF2Z307 99 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 IFNL4K9M1U5 179 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 IFNA17P01571 189 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 RAB3AP20336 220 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 GPR176Q14439 515 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF322Q6U7Q0 402 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF517Q6ZMY9 492 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 LIAT1Q6ZQX7 453 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 C19orf18Q8NEA5 215 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANKRD19PQ9H560 264 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 BCL2L10Q9HD36 194 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CCDC182A6NF36 153 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SPRY1O43609 319 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PMS2P2O95744 297 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ERGP11308 486 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PITPNBP48739 271 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 AQP6Q13520 282 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 PABPC1L2AQ5JQF8 200 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SFRP5Q5T4F7 317 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRIQKQ629K1 86 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SFXN4Q6P4A7 337 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 MBOAT2Q6ZWT7 520 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF554Q86TJ5 538 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CENPOQ9BU64 300 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM38AQ9H6F2 299 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 SEC14L4Q9UDX3 406 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 MEIKINA0A087WXM9 373 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRBV2A0A0J9YWF9 115 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 J3QR89 54 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TIMP3P35625 211 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 ECSCRQ19T08 205 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR6T1Q8NGN1 323 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 TNFAIP8L1Q8WVP5 186 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 CANT1Q8WVQ1 401 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 HDAC2Q92769 488 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 GPR27Q9NS67 375 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 POMT1Q9Y6A1 747 aa4.97□□□□□ -1.61
CDC42BPA-209ENST00000448940 DOCK11Q5JSL3 2073 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms