RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MTRF1O75570 445 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 GATBO75879 557 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 EPXP11678 715 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 CCL1P22362 96 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 CFL1P23528 166 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 MAPK3P27361 379 aaPredicted RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 FGF9P31371 208 aaPredicted RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 MAGEB1P43366 347 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 BSPH1Q075Z2 132 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 CTF1Q16619 201 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 ZMAT1Q5H9K5 638 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 C22orf42Q6IC83 251 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 PAMR1Q6UXH9 720 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 OR1J1Q8NGS3 322 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 THRSPQ92748 146 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 SOX7Q9BT81 388 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 BCL2L14Q9BZR8 327 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 ESRP2Q9H6T0 727 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 PTTG3PQ9NZH4 202 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 RSL24D1Q9UHA3 163 aaKnown RBP16.85■□□□□ 0.29
SGCE-207ENST00000447873 GSTK1Q9Y2Q3 226 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 SPEF1Q9Y4P9 236 aa16.85■□□□□ 0.29
SGCE-207ENST00000447873 DOPEY1Q5JWR5 2465 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 CADP27708 2225 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 A0A1W2PPK0 400 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 CASKO14936 926 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 CD2P06729 351 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 PLA2G2AP14555 144 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 ZNF12P17014 697 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 PPP1CBP62140 327 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 GK2Q14410 553 aaPredicted RBP16.84■□□□□ 0.29
SGCE-207ENST00000447873 PLPP7Q8NBV4 271 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 TMEM106AQ96A25 262 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 SPSB4Q96A44 273 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 DGCR14Q96DF8 476 aaKnown RBP16.84■□□□□ 0.29
SGCE-207ENST00000447873 RADILQ96JH8 1075 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 BCL7BQ9BQE9 202 aa16.84■□□□□ 0.29
SGCE-207ENST00000447873 ATP6V1G2-DDX39BF2Z307 99 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 J3QKU1 62 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 ABCD4O14678 606 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 DHRS3O75911 302 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 KIR2DL3P43628 341 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 NCS1P62166 190 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 SPOCK1Q08629 439 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 SPATA46Q5T0L3 261 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 FOXB2Q5VYV0 432 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 UNQ9370/PRO34162Q6UXP9 181 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 PGAP1Q75T13 922 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 MRPL21Q7Z2W9 205 aaKnown RBP16.83■□□□□ 0.28
SGCE-207ENST00000447873 C1orf174Q8IYL3 243 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 CCDC54Q8NEL0 328 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 PHYHIPQ92561 330 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 POFUT1Q9H488 388 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 OPA3Q9H6K4 179 aa16.83■□□□□ 0.28
SGCE-207ENST00000447873 ZNF275Q9NSD4 429 aaPredicted RBP16.83■□□□□ 0.28
SGCE-207ENST00000447873 ZNF701M0R085 212 aaPredicted RBP16.82■□□□□ 0.28
SGCE-207ENST00000447873 ARL6IP5O75915 188 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 RNF224P0DH78 156 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 TUBG1P23258 451 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 GSK3AP49840 483 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 VBP1P61758 197 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 FAM3AP98173 230 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 HLXQ14774 488 aaPredicted RBP16.82■□□□□ 0.28
SGCE-207ENST00000447873 OR14K1Q8NGZ2 314 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 SSC4DQ8WTU2 575 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 PLPPR2Q96GM1 343 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 KCTD7Q96MP8 289 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 DERL3Q96Q80 235 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 REPIN1Q9BWE0 567 aaKnown RBP16.82■□□□□ 0.28
SGCE-207ENST00000447873 OR2J1Q9GZK6 312 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 RNF167Q9H6Y7 350 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 PLEKHA1Q9HB21 404 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 NOX4Q9NPH5 578 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 TUBG2Q9NRH3 451 aa16.82■□□□□ 0.28
SGCE-207ENST00000447873 hCG_38984A0A1B0GV85 526 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 LOC390937A0A1W2PQ73 354 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 H3BMQ9 156 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 C19orf84I3L1E1 186 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 LMX1BO60663 402 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 CALRP27797 417 aaKnown RBP16.81■□□□□ 0.28
SGCE-207ENST00000447873 PRSS12P56730 875 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 ERVS71-1P61550 626 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.28
SGCE-207ENST00000447873 SNTB2Q13425 540 aaKnown RBP16.81■□□□□ 0.28
SGCE-207ENST00000447873 BEX5Q5H9J7 111 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 NCMAPQ5T1S8 102 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 FAM27D1Q5T7N8 215 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 SLC22A25Q6T423 547 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 SEMA6DQ8NFY4 1073 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 SLC25A40Q8TBP6 338 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 FGGYQ96C11 551 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 C12orf43Q96C57 262 aaKnown RBP16.81■□□□□ 0.28
SGCE-207ENST00000447873 PPIL3Q9H2H8 161 aaKnown RBP16.81■□□□□ 0.28
SGCE-207ENST00000447873 CRIM1Q9NZV1 1036 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 V9GYS6 101 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.81■□□□□ 0.28
SGCE-207ENST00000447873 A6NIN4 97 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 RAF1P04049 648 aa16.81■□□□□ 0.28
SGCE-207ENST00000447873 UCHL1P09936 223 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms