RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
MCF2L-217ENST00000441756 BCL2L14Q9BZR8 327 aa13.76□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF275Q9NSD4 429 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-217ENST00000441756 CCDC59Q9P031 241 aaKnown RBP13.76□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF319Q9P2F9 582 aa13.76□□□□□ -0.21
MCF2L-217ENST00000441756 V9GYS6 101 aa13.76□□□□□ -0.21
MCF2L-217ENST00000441756 IGHV2OR16-5A0A0B4J2B6 119 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 SMPD2O60906 423 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 C1QL1O75973 258 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 PTAFRP25105 342 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 GNALP38405 381 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 WNT5AP41221 380 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 PPP3R1P63098 170 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 NAAAQ02083 359 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 DGUOKQ16854 277 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 ZBTB37Q5TC79 503 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 ALKBH2Q6NS38 261 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 SEZ6L2Q6UXD5 910 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 Q6ZSR3 168 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 PGAP1Q75T13 922 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-217ENST00000441756 WFDC8Q8IUA0 241 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 CROCCP3Q8IVE0 287 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 SERPINA12Q8IW75 414 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 FTMTQ8N4E7 242 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 OR5D14Q8NGL3 314 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 PP6455Q8WZ26 134 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 SGK3Q96BR1 496 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 RNF167Q9H6Y7 350 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 NEK6Q9HC98 313 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 FOXJ3Q9UPW0 622 aa13.75□□□□□ -0.21
MCF2L-217ENST00000441756 SPENQ96T58 3664 aaKnown RBP13.74□□□□□ -0.21
MCF2L-217ENST00000441756 CHD6Q8TD26 2715 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 hCG_38984A0A1B0GV85 526 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 H3BSH0 61 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF35P13682 527 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 SRMP19623 302 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 SDC2P34741 201 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 THBS4P35443 961 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 RANBP1P43487 201 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 PSMD7P51665 324 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 UCP2P55851 309 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 PPP1CBP62140 327 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 RPS23P62266 143 aaKnown RBP13.74□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF92Q03936 586 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 RIPPLY1Q0D2K3 151 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 FAM27D1Q5T7N8 215 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 RFPL4BQ6ZWI9 263 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-217ENST00000441756 PARP16Q8N5Y8 322 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 OR14K1Q8NGZ2 314 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 OR2AE1Q8NHA4 323 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 DYNC2LI1Q8TCX1 351 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 FGGYQ96C11 551 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 LYZL4Q96KX0 146 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 PTTG3PQ9NZH4 202 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 STARD10Q9Y365 291 aa13.74□□□□□ -0.21
MCF2L-217ENST00000441756 IGSF10Q6WRI0 2623 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 A0A1W2PPK0 400 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 MEGF11A6BM72 1044 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 ANXA2P2A6NMY6 339 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 ZG16O60844 167 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 EPXP11678 715 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 SELEP16581 610 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 RAB3BP20337 219 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 TGFBR1P36897 503 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 DDOSTP39656 456 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 GSK3AP49840 483 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 RORCP51449 518 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 OR8B8Q15620 311 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF101Q8IZC7 436 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 NKAIN3Q8N8D7 197 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 CSNK2A3Q8NEV1 391 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 OR1J1Q8NGS3 322 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 ITLN2Q8WWU7 325 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-217ENST00000441756 AP3S1Q92572 193 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 SLC25A46Q96AG3 418 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 NPAP1Q9NZP6 1156 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 PIGLQ9Y2B2 252 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 ESPL1Q14674 2120 aa13.73□□□□□ -0.21
MCF2L-217ENST00000441756 C5orf63A6NC05 138 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 GGT3PA6NGU5 568 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 PIN1P1O15428 100 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 TMEM127O75204 238 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 NGFP01138 241 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-217ENST00000441756 FAM157BP0CG42 384 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 ZNF182P17025 639 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-217ENST00000441756 RAB3AP20336 220 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 FAM3AP98173 230 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 MXD1Q05195 221 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 GK2Q14410 553 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-217ENST00000441756 FBXW12Q6X9E4 464 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 ZC3HAV1LQ96H79 300 aaKnown RBP13.72□□□□□ -0.21
MCF2L-217ENST00000441756 WFIKKN1Q96NZ8 548 aa13.72□□□□□ -0.21
MCF2L-217ENST00000441756 TECTBQ96PL2 329 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms