RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TRBV5-7A0A0A0MS05 114 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 MTRF1O75570 445 aaKnown RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 CFL1P23528 166 aaKnown RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 CALRP27797 417 aaKnown RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 NAAAQ02083 359 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 FAM27D1Q5T7N8 215 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 UNQ6126/PRO20091Q6UXV3 157 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 NDNFQ8TB73 568 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 ZC3HAV1LQ96H79 300 aaKnown RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 SOX7Q9BT81 388 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 PPIL3Q9H2H8 161 aaKnown RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 NOX4Q9NPH5 578 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 ZNF275Q9NSD4 429 aaPredicted RBP19.88■□□□□ 0.77
CPSF4-204ENST00000436336 NDRG3Q9UGV2 375 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 STARD10Q9Y365 291 aa19.88■□□□□ 0.77
CPSF4-204ENST00000436336 IGHV2OR16-5A0A0B4J2B6 119 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 A0A1W2PPK0 400 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 LOC390937A0A1W2PQ73 354 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 PIN1P1O15428 100 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 SMPD2O60906 423 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 DHRS3O75911 302 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 HSD17B12Q53GQ0 312 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 RFPL4BQ6ZWI9 263 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 WFDC8Q8IUA0 241 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 OR14K1Q8NGZ2 314 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 DCSTAMPQ9H295 470 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 V9GYS6 101 aa19.87■□□□□ 0.77
CPSF4-204ENST00000436336 GRNP28799 593 aaKnown RBP19.86■□□□□ 0.77
CPSF4-204ENST00000436336 SERPINB10P48595 397 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 UCP2P55851 309 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 ZNF92Q03936 586 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 CNPY1Q3B7I2 92 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 OPA3Q9H6K4 179 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 NGBQ9NPG2 151 aa19.86■□□□□ 0.77
CPSF4-204ENST00000436336 CRYAAP02489 173 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 MYL9P24844 172 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 CALCRP30988 508 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 TMEM108Q6UXF1 575 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 hCG_38984A0A1B0GV85 526 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 A0A1W2PPW3 197 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 DHRS7CA6NNS2 312 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 FAM157BP0CG42 384 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 RAD52P43351 418 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 MTNR1BP49286 362 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 FAM3AP98173 230 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 C1orf174Q8IYL3 243 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 ITFG2Q969R8 447 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 REPIN1Q9BWE0 567 aaKnown RBP19.85■□□□□ 0.77
CPSF4-204ENST00000436336 OR51B6Q9H340 312 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 PTTG3PQ9NZH4 202 aa19.85■□□□□ 0.77
CPSF4-204ENST00000436336 TRAV1-2A0A0B4J238 106 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 LMX1BO60663 402 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 CDRT1O95170 752 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 IL1AP01583 271 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 SRMP19623 302 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 TUBG1P23258 451 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 PTAFRP25105 342 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 CD40P25942 277 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 SDC2P34741 201 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 PPP1CBP62140 327 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 GK2Q14410 553 aaPredicted RBP19.84■□□□□ 0.77
CPSF4-204ENST00000436336 PARP16Q8N5Y8 322 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 FGGYQ96C11 551 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 C10orf35Q96D05 121 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 BCL2L14Q9BZR8 327 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 PLEKHA1Q9HB21 404 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 TUBG2Q9NRH3 451 aa19.84■□□□□ 0.77
CPSF4-204ENST00000436336 FAM208BQ5VWN6 2430 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 SHISA3A0PJX4 238 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 MAP2K3P46734 347 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 PGAP1Q75T13 922 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 MRPL21Q7Z2W9 205 aaKnown RBP19.83■□□□□ 0.77
CPSF4-204ENST00000436336 SERPINA12Q8IW75 414 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 SEMA6DQ8NFY4 1073 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 OR1J1Q8NGS3 322 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 ORAI1Q96D31 301 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 SLITRK2Q9H156 845 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 POFUT1Q9H488 388 aa19.83■□□□□ 0.77
CPSF4-204ENST00000436336 CASKO14936 926 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 EPXP11678 715 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 ZNF20P17024 532 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 FSTP19883 344 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 GSK3AP49840 483 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 OR8B8Q15620 311 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 TPRA1Q86W33 373 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 DYNC2LI1Q8TCX1 351 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 ADAT3Q96EY9 351 aaPredicted RBP19.82■□□□□ 0.76
CPSF4-204ENST00000436336 TCF7L1Q9HCS4 588 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 SNTG1Q9NSN8 517 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 CKLFQ9UBR5 152 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 FOXJ3Q9UPW0 622 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 SPEF1Q9Y4P9 236 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 TUBAL3A6NHL2 446 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 RPS19P39019 145 aaKnown RBP19.82■□□□□ 0.76
CPSF4-204ENST00000436336 RIPPLY1Q0D2K3 151 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 LINC01560Q8TB33 94 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 DCUN1D5Q9BTE7 237 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 RALYQ9UKM9 306 aaKnown RBP19.82■□□□□ 0.76
CPSF4-204ENST00000436336 PIGLQ9Y2B2 252 aa19.82■□□□□ 0.76
CPSF4-204ENST00000436336 ZNF182P17025 639 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms