RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PTAFRP25105 342 aa22.84■■□□□ 1.25
TMEM248-205ENST00000433271 RAD52P43351 418 aa22.84■■□□□ 1.25
TMEM248-205ENST00000433271 PAMR1Q6UXH9 720 aa22.84■■□□□ 1.25
TMEM248-205ENST00000433271 RFPL4BQ6ZWI9 263 aa22.84■■□□□ 1.25
TMEM248-205ENST00000433271 CCDC54Q8NEL0 328 aa22.84■■□□□ 1.25
TMEM248-205ENST00000433271 TSEN15Q8WW01 171 aaKnown RBP22.84■■□□□ 1.25
TMEM248-205ENST00000433271 AKAP1Q92667 903 aaKnown RBP eCLIP22.84■■□□□ 1.25
TMEM248-205ENST00000433271 ANKHD1Q8IWZ3 2542 aaKnown RBP22.84■■□□□ 1.25
TMEM248-205ENST00000433271 FAM157BP0CG42 384 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 CFL1P23528 166 aaKnown RBP22.83■■□□□ 1.25
TMEM248-205ENST00000433271 MAPK3P27361 379 aaPredicted RBP22.83■■□□□ 1.25
TMEM248-205ENST00000433271 ZNF92Q03936 586 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 C22orf42Q6IC83 251 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 Q6ZSR3 168 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 FAM71F1Q96KD3 344 aaPredicted RBP22.83■■□□□ 1.25
TMEM248-205ENST00000433271 DACH2Q96NX9 599 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 DHDHQ9UQ10 334 aa22.83■■□□□ 1.25
TMEM248-205ENST00000433271 LOC390937A0A1W2PQ73 354 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 H3BMQ9 156 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 MTRF1O75570 445 aaKnown RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 ZNF12P17014 697 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 PEX19P40855 299 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 MAGEB1P43366 347 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 SOX2P48431 317 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 C1orf174Q8IYL3 243 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 OR13C3Q8NGS6 347 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 DERL3Q96Q80 235 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 SOX7Q9BT81 388 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 OR51B6Q9H340 312 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 ZNF275Q9NSD4 429 aaPredicted RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 USP9XQ93008 2570 aaPredicted RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 HEATR1Q9H583 2144 aaKnown RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 DPRXA6NFQ7 191 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 DHRS3O75911 302 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 VBP1P61758 197 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 PPP1CBP62140 327 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 NCS1P62166 190 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 TMEM106AQ96A25 262 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 REPIN1Q9BWE0 567 aaKnown RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 BCL2L14Q9BZR8 327 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 PPIL3Q9H2H8 161 aaKnown RBP22.82■■□□□ 1.24
TMEM248-205ENST00000433271 OPA3Q9H6K4 179 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 RNF167Q9H6Y7 350 aa22.82■■□□□ 1.24
TMEM248-205ENST00000433271 DOPEY1Q5JWR5 2465 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 RAF1P04049 648 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 CD2P06729 351 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 UCHL1P09936 223 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 TUBG1P23258 451 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 GK2Q14410 553 aaPredicted RBP22.81■■□□□ 1.24
TMEM248-205ENST00000433271 OR14K1Q8NGZ2 314 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 C12orf43Q96C57 262 aaKnown RBP22.81■■□□□ 1.24
TMEM248-205ENST00000433271 KCTD7Q96MP8 289 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 TUBG2Q9NRH3 451 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 SPEF1Q9Y4P9 236 aa22.81■■□□□ 1.24
TMEM248-205ENST00000433271 TRBV5-7A0A0A0MS05 114 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 SLC22A1O15245 554 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 ARL6IP5O75915 188 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 FAM3AP98173 230 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 FAM27D1Q5T7N8 215 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 OR1J1Q8NGS3 322 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 ITFG2Q969R8 447 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 POFUT1Q9H488 388 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 ESRP2Q9H6T0 727 aaKnown RBP22.8■■□□□ 1.24
TMEM248-205ENST00000433271 NOX4Q9NPH5 578 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 PTTG3PQ9NZH4 202 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 V9GYS6 101 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 CADP27708 2225 aa22.8■■□□□ 1.24
TMEM248-205ENST00000433271 hCG_38984A0A1B0GV85 526 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 A0A1W2PPK0 400 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 DHRS7CA6NNS2 312 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 PIN1P1O15428 100 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 GSK3AP49840 483 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 BSPH1Q075Z2 132 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 PGAP1Q75T13 922 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 MRPL21Q7Z2W9 205 aaKnown RBP22.79■■□□□ 1.24
TMEM248-205ENST00000433271 CALRP27797 417 aaKnown RBP22.79■■□□□ 1.24
TMEM248-205ENST00000433271 HLXQ14774 488 aaPredicted RBP22.79■■□□□ 1.24
TMEM248-205ENST00000433271 FBXW12Q6X9E4 464 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 FGGYQ96C11 551 aa22.79■■□□□ 1.24
TMEM248-205ENST00000433271 CASKO14936 926 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 LMX1BO60663 402 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 PLA2G2AP14555 144 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 TGFBR1P36897 503 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 MAP2K3P46734 347 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 OR8B8Q15620 311 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 HSD17B12Q53GQ0 312 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 NCMAPQ5T1S8 102 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 PARP16Q8N5Y8 322 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 SEMA6DQ8NFY4 1073 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 C10orf35Q96D05 121 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 OR2J1Q9GZK6 312 aa22.78■■□□□ 1.24
TMEM248-205ENST00000433271 ATP6V1G2-DDX39BF2Z307 99 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 ABCD4O14678 606 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 RNF224P0DH78 156 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 ERVS71-1P61550 626 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 NKX6-1P78426 367 aaPredicted RBP22.77■■□□□ 1.24
TMEM248-205ENST00000433271 SRSF1Q07955 248 aaKnown RBP eCLIP22.77■■□□□ 1.24
TMEM248-205ENST00000433271 SPOCK1Q08629 439 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 SPATA46Q5T0L3 261 aa22.77■■□□□ 1.24
TMEM248-205ENST00000433271 SERPINA12Q8IW75 414 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms