RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 ZNF101Q8IZC7 436 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 OR5T2Q8NGG2 359 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 MRAPQ8TCY5 172 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 SLAMF6Q96DU3 332 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 STEAP1Q9UHE8 339 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CYB5R3P00387 301 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 GYPAP02724 150 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CLPSP04118 112 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 NUDT7P0C024 238 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 GLP1RP43220 463 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CBX5P45973 191 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ST3GAL4Q11206 333 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 MRPL28Q13084 256 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PGGHGQ32M88 737 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 REC114Q7Z4M0 266 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 MOB3BQ86TA1 216 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 OR13C3Q8NGS6 347 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 FCRL1Q96LA6 429 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ARHGDIGQ99819 225 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 EXOSC4Q9NPD3 245 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ACOXLQ9NUZ1 547 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 GNG8Q9UK08 70 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 BLOC1S6Q9UL45 172 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 RANBP2P49792 3224 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CLPSL1A2RUU4 121 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF732B4DXR9 585 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TYROBPO43914 113 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 FADS2O95864 444 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV3-13P01766 116 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CHRM2P08172 466 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 GPX2P18283 190 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PYCR1P32322 319 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM267Q0VDI3 215 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 OR2T5Q6IEZ7 315 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PLBD1Q6P4A8 553 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TREML4Q6UXN2 200 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PGAM4Q8N0Y7 254 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF565Q8N9K5 539 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 OR2T29Q8NH02 315 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PFN4Q8NHR9 129 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF251Q9BRH9 671 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ARMCX1Q9P291 453 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 POMT1Q9Y6A1 747 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 SIRT4Q9Y6E7 314 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 U3KQV3 271 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 DSPPQ9NZW4 1301 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 USP9XQ93008 2570 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 A0A0B4J203 849 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 DHRS12A0PJE2 317 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 F5H5P2 479 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CLPTM1O96005 669 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 RPS4Y1P22090 263 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 IL2RGP31785 369 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 WDR4P57081 412 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 ADGRE4PQ86SQ3 457 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM86BQ8N661 226 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 NARS2Q96I59 477 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 PHB2Q99623 299 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 DCUN1D5Q9BTE7 237 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 MMP27Q9H306 513 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 MRPL15Q9P015 296 aaKnown RBP3.93□□□□□ -1.78
UBE4A-202ENST00000431736 VAPAQ9P0L0 249 aa3.93□□□□□ -1.78
UBE4A-202ENST00000431736 CREBL2O60519 120 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RBMXL2O75526 392 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RPL31P62899 125 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PRKCDQ05655 676 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TAF9Q16594 264 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 WDR31Q8NA23 367 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 OR5M11Q96RB7 305 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZMAT4Q9H898 229 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 SIRT7Q9NRC8 400 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 SNTG1Q9NSN8 517 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PIGLQ9Y2B2 252 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RAP2AP10114 183 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 DBTP11182 482 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NCK1P16333 377 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 OMGP23515 440 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 COL8A2P25067 703 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 EDNRAP25101 427 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ERFP50548 548 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 SLC35A2P78381 396 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PSG4Q00888 419 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 GPR176Q14439 515 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 GINS1Q14691 196 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CDSNQ15517 529 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 HAGHLQ6PII5 290 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TSEN54Q7Z6J9 526 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RIMKLAQ8IXN7 391 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZCCHC24Q8N2G6 241 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CYGBQ8WWM9 190 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM54Q969K7 222 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 METTL8Q9H825 291 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 WDR76Q9H967 626 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CSPG4Q6UVK1 2322 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 A0A1W2PRX2 142 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms