RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 OR52A1Q9UKL2 312 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 R4GMQ9 66 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 ARID1AO14497 2285 aa12.42□□□□□ -0.42
SGCE-204ENST00000428696 IRGMA1A4Y4 181 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 LILRA1O75019 489 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 SULT1C4O75897 302 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 IGHV1-46P01743 117 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 HPXP02790 462 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 PAX1P15863 534 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 MYL12AP19105 171 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 CA6P23280 308 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 GSK3AP49840 483 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 SNCBQ16143 134 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 PCGF3Q3KNV8 242 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 PRSS45Q7RTY3 260 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 OR10AD1Q8NGE0 317 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 OR13G1Q8NGZ3 307 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 OR51E1Q8TCB6 317 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 UBASH3BQ8TF42 649 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 ELMOD3Q96FG2 381 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 FAM71F1Q96KD3 344 aaPredicted RBP12.41□□□□□ -0.42
SGCE-204ENST00000428696 C4orf36Q96KX1 117 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
SGCE-204ENST00000428696 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
SGCE-204ENST00000428696 OCEL1Q9H607 264 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 ACOXLQ9NUZ1 547 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 FAM206AQ9NX38 181 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 ZDHHC8Q9ULC8 765 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
SGCE-204ENST00000428696 ANKRD30BLA7E2S9 258 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 H0YL77 283 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 J3QRE1 110 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 CFL1P23528 166 aaKnown RBP12.4□□□□□ -0.42
SGCE-204ENST00000428696 DCTDP32321 178 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 FAM3AP98173 230 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 GALEQ14376 348 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 OR8G1Q15617 311 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 Q6ZR03 302 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 STX19Q8N4C7 294 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 ZNF540Q8NDQ6 660 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 OR56B2PQ8NGI1 322 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 FAM168AQ92567 244 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 GGHQ92820 318 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 TMEM80Q96HE8 168 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
SGCE-204ENST00000428696 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 ERVK13-1Q9NX77 482 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 SCN3BQ9NY72 215 aa12.4□□□□□ -0.42
SGCE-204ENST00000428696 CGGBP1Q9UFW8 167 aaPredicted RBP12.4□□□□□ -0.42
SGCE-204ENST00000428696 EFCAB10A6NFE3 127 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 TRIM64A6NGJ6 449 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 TRIM64BA6NI03 449 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 IQCF6A8MYZ5 107 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 F5H5P2 479 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 P2RY10O00398 339 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 SMAD7O15105 426 aaKnown RBP12.39□□□□□ -0.43
SGCE-204ENST00000428696 COL8A2P25067 703 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 GNALP38405 381 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 PDLIM4P50479 330 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 MMP16P51512 607 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 ACTA2P62736 377 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 ACTG2P63267 376 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 MED21Q13503 144 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 C6orf141Q5SZD1 244 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 AHSA2Q719I0 299 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 CCL17Q92583 94 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 RORBQ92753 470 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 RGCCQ9H4X1 137 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 INPP5EQ9NRR6 644 aa12.39□□□□□ -0.43
SGCE-204ENST00000428696 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
SGCE-204ENST00000428696 NCR1O76036 304 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 HTR1AP08908 422 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 MYF6P23409 242 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 DCKP27707 260 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 ETV1P50549 477 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
SGCE-204ENST00000428696 TNK1Q13470 666 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 ZNF684Q5T5D7 378 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 LAIR2Q6ISS4 152 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 PRSS57Q6UWY2 283 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 TMPRSS11AQ6ZMR5 421 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 PIGCQ92535 297 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 RDH5Q92781 318 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 DVL3Q92997 716 aaPredicted RBP12.38□□□□□ -0.43
SGCE-204ENST00000428696 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 ZNF184Q99676 751 aaPredicted RBP12.38□□□□□ -0.43
SGCE-204ENST00000428696 SLC30A2Q9BRI3 323 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 SOX7Q9BT81 388 aa12.38□□□□□ -0.43
SGCE-204ENST00000428696 PAPOLGQ9BWT3 736 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms