RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GTF3AQ92664 365 aaKnown RBP11.57□□□□□ -0.56
PRPF39-202ENST00000424478 C1QTNF5Q9BXJ0 243 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 MYEF2Q9P2K5 600 aaKnown RBP11.57□□□□□ -0.56
PRPF39-202ENST00000424478 CRNNQ9UBG3 495 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-202ENST00000424478 DUSP13Q9UII6 198 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 A0A1W2PPR1 153 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 SYT7O43581 403 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 PPP1CBP62140 327 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 MXD1Q05195 221 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 MEX3BQ6ZN04 569 aaKnown RBP11.57□□□□□ -0.56
PRPF39-202ENST00000424478 CEACAM19Q7Z692 300 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 KCNS3Q9BQ31 491 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 SYT3Q9BQG1 590 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 OBP2BQ9NPH6 170 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 ZNF281Q9Y2X9 895 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 WIPF3A6NGB9 483 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 GABRPO00591 440 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 CAV3P56539 151 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 ACSM1Q08AH1 577 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 ACSM3Q53FZ2 586 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 TMEM108Q6UXF1 575 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 RHOUQ7L0Q8 258 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 OR13C3Q8NGS6 347 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 FGGYQ96C11 551 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 ADAT3Q96EY9 351 aaPredicted RBP11.56□□□□□ -0.56
PRPF39-202ENST00000424478 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 USF3Q68DE3 2245 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 PIN1P1O15428 100 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 ASPHD2Q6ICH7 369 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 OR1J2Q8NGS2 313 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 TMEM106AQ96A25 262 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 LRRC46Q96FV0 321 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 SPACA5Q96QH8 159 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 OR10A2Q9H208 303 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 ATP23Q9Y6H3 246 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
PRPF39-202ENST00000424478 DEFB108AA8MXU0 73 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 AIREO43918 545 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 NCR1O76036 304 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 COX5BP10606 129 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 TAS2R43P59537 309 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CCDC58Q4VC31 144 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 COLCA1Q6ZS62 124 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 DPPA2Q7Z7J5 298 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 APOBEC3DQ96AK3 386 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CMBLQ96DG6 245 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 EIF3KQ9UBQ5 218 aaKnown RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 TRAV8-7A0A075B6U6 113 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 TMEM212A6NML5 194 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 HLA-DPB1P04440 258 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CLEC2LP0C7M8 214 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 SELEP16581 610 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 AGAP20933 346 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CALRP27797 417 aaKnown RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 THBS4P35443 961 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 FAM3AP98173 230 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CEP78Q5JTW2 689 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 FDX2Q6P4F2 183 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 ZCCHC24Q8N2G6 241 aaKnown RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 DNAAF1Q8NEP3 725 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 OR56B2PQ8NGI1 322 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 OR51A2Q8NGJ7 313 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 RPS4Y2Q8TD47 263 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 TPK1Q9H3S4 243 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 A0A1B0GVI7 797 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 CASKO14936 926 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 GABRA5P31644 462 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 DCTDP32321 178 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 GNALP38405 381 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 PGAP1Q75T13 922 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 MRPL21Q7Z2W9 205 aaKnown RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 KLF14Q8TD94 323 aaPredicted RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 TXNL4BQ9NX01 149 aaKnown RBP11.55□□□□□ -0.56
PRPF39-202ENST00000424478 PIGLQ9Y2B2 252 aa11.55□□□□□ -0.56
PRPF39-202ENST00000424478 PSMA1P25786 263 aaKnown RBP11.54□□□□□ -0.56
PRPF39-202ENST00000424478 SORDQ00796 357 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 BDH1Q02338 343 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 WACQ9BTA9 647 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 PCSK6P29122 969 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 GSK3AP49840 483 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 CCR9P51686 369 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 PSG7Q13046 419 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 CTF1Q16619 201 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 ZMAT1Q5H9K5 638 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 NCMAPQ5T1S8 102 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 OR52H1Q8NGJ2 320 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 RBM38Q9H0Z9 239 aaKnown RBP11.54□□□□□ -0.56
PRPF39-202ENST00000424478 MSL2Q9HCI7 577 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 TAS2R4Q9NYW5 299 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 HHLA2Q9UM44 414 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 DHDHQ9UQ10 334 aa11.54□□□□□ -0.56
PRPF39-202ENST00000424478 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 MAS1P04201 325 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 PTAFRP25105 342 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 HOXA4Q00056 320 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 SPCS2Q15005 226 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms