RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 FAM74A7A6NL05 159 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 RAD51DO75771 328 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 IL2RAP01589 272 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 SLC25A4P12235 298 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 PGAM2P15259 253 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 SERPINF1P36955 418 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF41P51814 821 aaPredicted RBP12.82□□□□□ -0.36
HDAC9-208ENST00000417496 NKAIN1Q4KMZ8 207 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 OR8B12Q8NGG6 310 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ASB13Q8WXK3 278 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 MAFIPQ8WZ33 124 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF107Q9UII5 783 aaPredicted RBP12.82□□□□□ -0.36
HDAC9-208ENST00000417496 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ARPC4-TTLL3A0A0A6YYG9 625 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM14DPA8MWL7 114 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ADAP1O75689 374 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM50BP56557 158 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 SRSF4Q08170 494 aaKnown RBP12.82□□□□□ -0.36
HDAC9-208ENST00000417496 SLC9A3R2Q15599 337 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 LPCAT3Q6P1A2 487 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 OR5AS1Q8N127 324 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
HDAC9-208ENST00000417496 OR1S2Q8NGQ3 325 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 OR6C1Q96RD1 312 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 GAREM1Q9H706 876 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
HDAC9-208ENST00000417496 MRPS28Q9Y2Q9 187 aaKnown RBP12.82□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF208O43345 1280 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 SRFP11831 508 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PPIAP62937 165 aaKnown RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 RIPPLY1Q0D2K3 151 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF345Q14585 488 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 UEVLDQ8IX04 471 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 WDR77Q9BQA1 342 aaPredicted RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 UQCC2Q9BRT2 126 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 METTL7AQ9H8H3 244 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 GDF9O60383 454 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 HCKP08631 526 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PGA4P0DJD7 388 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PGA3P0DJD8 388 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 MC2RQ01718 297 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 SMAD4Q13485 552 aaKnown RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PLPPR5Q32ZL2 321 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 THEM4Q5T1C6 240 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 PRAMEF20Q5VT98 475 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 RHBDD2Q6NTF9 364 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 ZDHHC22Q8N966 263 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 OR2AJ1Q8NGZ0 328 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 ARHGAP5-AS1Q96IT6 56 aa12.81□□□□□ -0.36
HDAC9-208ENST00000417496 C1orf147Q96MC9 270 aaPredicted RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
HDAC9-208ENST00000417496 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 TOR1AO14656 332 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 CRTAPO75718 401 aaPredicted RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 HTR3BO95264 441 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 DUS4LO95620 317 aaKnown RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 GP1BAP07359 652 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 CTRB1P17538 263 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 PTGDSP41222 190 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 CTRB2Q6GPI1 263 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF529Q6P280 563 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 C1QL2Q7Z5L3 287 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 DTX1Q86Y01 620 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 CADM4Q8NFZ8 388 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 DCUN1D4Q92564 292 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 LIN37Q96GY3 246 aaPredicted RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 GPER1Q99527 375 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 ST6GALNAC5Q9BVH7 336 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 C5orf66Q9H5L9 145 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 ASF1BQ9NVP2 202 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 DNASE2O00115 360 aaPredicted RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 CDC14BO60729 498 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 QDPRP09417 244 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 ICAM2P13598 275 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 HLA-GP17693 338 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 PSMB6P28072 239 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 P2RY4P51582 365 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 GABREP78334 506 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM176BQ3YBM2 270 aaPredicted RBP12.8□□□□□ -0.36
HDAC9-208ENST00000417496 HOGA1Q86XE5 327 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 OR5AP2Q8NGF4 316 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 OR6S1Q8NH40 331 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 KLHL13Q9P2N7 655 aa12.8□□□□□ -0.36
HDAC9-208ENST00000417496 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 IGKV1-9A0A0C4DH69 117 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF878C9JN71 531 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms