RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 VN1R1Q9GZP7 353 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 CHMP1AQ9HD42 196 aaPredicted RBP8.7□□□□□ -1.02
CD44-206ENST00000415148 SEMA5BQ9P283 1151 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 MLXQ9UH92 298 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 SLCO1B1Q9Y6L6 691 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 PCDH15Q96QU1 1955 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 RP1P56715 2156 aa8.7□□□□□ -1.02
CD44-206ENST00000415148 A0A1W2PNV4 684 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 LMO7DNF2Z398 122 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 H7C2Y5 167 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ETV2O00321 342 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 MTRF1O75570 445 aaKnown RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 SPP1P10451 314 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 CD79AP11912 226 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 LYL1P12980 280 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 AKR1C4P17516 323 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 IL11P20809 199 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 VAMP1P23763 118 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 LAP3P28838 519 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ZNF93P35789 620 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 RNF4P78317 190 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 FMODQ06828 376 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 SCRN3Q0VDG4 424 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 C10orf91Q5T1B1 145 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ETV3LQ6ZN32 361 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 PGAP1Q75T13 922 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 SYT13Q7L8C5 426 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ANGPTL5Q86XS5 388 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 SVBPQ8N300 66 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 GTPBP8Q8N3Z3 284 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 OR4K15Q8NH41 348 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 OR1L3Q8NH93 324 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 C11orf40Q8WZ69 217 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ADAT3Q96EY9 351 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 RNF126Q9BV68 326 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ACKR4Q9NPB9 350 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 CYTL1Q9NRR1 136 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 C13orf42A0A1B0GVH6 325 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 A0A1B0GX78 115 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 C5orf51A6NDU8 294 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 SSX5O60225 188 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 GLAP06280 429 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 GNB3P16520 340 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ANOS1P23352 680 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 CBX5P45973 191 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 POU3F1Q03052 451 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 EIF3IQ13347 325 aaKnown RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 RAB30Q15771 203 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 NSUN5P2Q63ZY6 315 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 NAA40Q86UY6 237 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 PLXDC1Q8IUK5 500 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 KCNG3Q8TAE7 436 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ARL5BQ96KC2 179 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 MRPL13Q9BYD1 178 aaKnown RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 RAB18Q9NP72 206 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 ALKBH4Q9NXW9 302 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 CTSFQ9UBX1 484 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 NDRG3Q9UGV2 375 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 GPR132Q9UNW8 380 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 RPH3AQ9Y2J0 694 aaPredicted RBP8.69□□□□□ -1.02
CD44-206ENST00000415148 CSAG2Q9Y5P2 127 aa8.69□□□□□ -1.02
CD44-206ENST00000415148 IGKV1D-43A0A0B4J1Z2 117 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 MEX3AA1L020 520 aaKnown RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 LIPT2A6NK58 231 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 VSTM2BA6NLU5 285 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 F8W036 122 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 CRYBA1P05813 215 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 MSX1P28360 303 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SERPINF1P36955 418 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 HOXA1P49639 335 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 RAB13P51153 203 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 EMP2P54851 167 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 HNRNPKP61978 463 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD44-206ENST00000415148 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 FOXK1P85037 733 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SLC25A53Q5H9E4 307 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 AWAT2Q6E213 333 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 KMT5CQ86Y97 462 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 BAP18Q8IXM2 172 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 ZSCAN4Q8NAM6 433 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 ADPRHL1Q8NDY3 354 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 RXFP4Q8TDU9 374 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 TGIF2Q9GZN2 237 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 LPAR5Q9H1C0 372 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 PTGES2Q9H7Z7 377 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SUSD2Q9UGT4 822 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SRPK3Q9UPE1 567 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 IGHV1OR15-9A0A0B4J2B8 117 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 C9JQL5 133 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 PMP2P02689 132 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 FAM157CP0CG43 387 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 ZNF20P17024 532 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 PI3P19957 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms