RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SPEF1Q9Y4P9 236 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 V9GYS6 101 aa12.29□□□□□ -0.44
SF3B1-204ENST00000414963 J3QKU1 62 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 MTRF1O75570 445 aaKnown RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 DHRS3O75911 302 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ATE1O95260 518 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 OCM2P0CE71 109 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 MAPK3P27361 379 aaPredicted RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 PPP1CBP62140 327 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF92Q03936 586 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 GK2Q14410 553 aaPredicted RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ODF4Q2M2E3 257 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ZMAT1Q5H9K5 638 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 KRT74Q7RTS7 529 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 CEACAM19Q7Z692 300 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 OR51A4Q8NGJ6 313 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 OR14K1Q8NGZ2 314 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 FAM222BQ8WU58 562 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 C10orf35Q96D05 121 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 TRMT61AQ96FX7 289 aaKnown RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 RADILQ96JH8 1075 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 CHCHD6Q9BRQ6 235 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 TXNL4BQ9NX01 149 aaKnown RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 ANKHD1Q8IWZ3 2542 aaKnown RBP12.28□□□□□ -0.44
SF3B1-204ENST00000414963 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
SF3B1-204ENST00000414963 hCG_38984A0A1B0GV85 526 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 PYCARD-AS1I3L0S3 204 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 UCHL1P09936 223 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 RNF224P0DH78 156 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 KIR2DL3P43628 341 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 GSK3AP49840 483 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 FAM3AP98173 230 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 BSPH1Q075Z2 132 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
SF3B1-204ENST00000414963 INSL4Q14641 139 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 OR8B8Q15620 311 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 BEX5Q5H9J7 111 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 DMRTC2Q8IXT2 367 aaPredicted RBP12.27□□□□□ -0.45
SF3B1-204ENST00000414963 PARP16Q8N5Y8 322 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 NUP37Q8NFH4 326 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 OR2AE1Q8NHA4 323 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 SSC4DQ8WTU2 575 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 MARS2Q96GW9 593 aaKnown RBP12.27□□□□□ -0.45
SF3B1-204ENST00000414963 DERL3Q96Q80 235 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 OR14A2Q96R54 314 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 CENPOQ9BU64 300 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 DHDHQ9UQ10 334 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 GSTK1Q9Y2Q3 226 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 SPTBN1Q01082 2364 aaKnown RBP12.27□□□□□ -0.45
SF3B1-204ENST00000414963 HCFC1P51610 2035 aa12.27□□□□□ -0.45
SF3B1-204ENST00000414963 TRIM64BA6NI03 449 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 CASKO14936 926 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 PIN1P1O15428 100 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 ARL6IP5O75915 188 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 CD2P06729 351 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 FAM157BP0CG42 384 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 RAC2P15153 192 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 GLRXP35754 106 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 DDOSTP39656 456 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 MAP2K3P46734 347 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 TNK1Q13470 666 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 ZBTB37Q5TC79 503 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
SF3B1-204ENST00000414963 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 OR1J1Q8NGS3 322 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 OR13C3Q8NGS6 347 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 TMEM106AQ96A25 262 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 HAVCR1Q96D42 359 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
SF3B1-204ENST00000414963 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 PPIL3Q9H2H8 161 aaKnown RBP12.26□□□□□ -0.45
SF3B1-204ENST00000414963 POFUT1Q9H488 388 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 PTTG3PQ9NZH4 202 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 CRIM1Q9NZV1 1036 aa12.26□□□□□ -0.45
SF3B1-204ENST00000414963 RSL24D1Q9UHA3 163 aaKnown RBP12.26□□□□□ -0.45
SF3B1-204ENST00000414963 TRAV1-2A0A0B4J238 106 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.25□□□□□ -0.45
SF3B1-204ENST00000414963 DEFB108AA8MXU0 73 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 ABCD4O14678 606 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 SLC22A1O15245 554 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 NOL3O60936 208 aaKnown RBP12.25□□□□□ -0.45
SF3B1-204ENST00000414963 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
SF3B1-204ENST00000414963 MAGEB1P43366 347 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 SOX2P48431 317 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 RPS23P62266 143 aaKnown RBP12.25□□□□□ -0.45
SF3B1-204ENST00000414963 RIPPLY1Q0D2K3 151 aa12.25□□□□□ -0.45
SF3B1-204ENST00000414963 HLXQ14774 488 aaPredicted RBP12.25□□□□□ -0.45
SF3B1-204ENST00000414963 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms