RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 AGAP6Q5VW22 663 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TMEM268Q5VZI3 342 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GPR139Q6DWJ6 353 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 C11orf71Q6IPW1 123 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZNF770Q6IQ21 691 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZNF774Q6NX45 483 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TMEM154Q6P9G4 183 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 DPY19L2P2Q6ZN68 376 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZNF620Q6ZNG0 422 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CCDC121Q6ZUS5 278 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 Q71RC1 249 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZNF627Q7L945 461 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SSX8Q7RTT4 187 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 LRP11Q86VZ4 500 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TGIF2LYQ8IUE0 185 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 LINC00346Q8IVM7 164 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZCCHC24Q8N2G6 241 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 CIARTQ8N365 385 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 SVOPLQ8N434 492 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TMEM217Q8N7C4 229 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SLC30A7Q8NEW0 376 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR52L1Q8NGH7 329 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR52E2Q8NGJ4 325 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR51L1Q8NGJ5 315 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR9Q1Q8NGQ5 310 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OR4Q3Q8NH05 313 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GIPC3Q8TF64 312 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 ZNRF4Q8WWF5 429 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 C11orf40Q8WZ69 217 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 LINC00476Q8WZB0 136 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SLC7A6Q92536 515 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 OTULINQ96BN8 352 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 GPX7Q96SL4 187 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 SMR3AQ99954 134 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 NIPSNAP1Q9BPW8 284 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TSSK6Q9BXA6 273 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 NDEL1Q9GZM8 345 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CXXC4Q9H2H0 198 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 LRMDAQ9H2I8 198 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 KCNN2Q9H2S1 579 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 TPK1Q9H3S4 243 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CXorf56Q9H5V9 222 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 MED20Q9H944 212 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 SIAEQ9HAT2 523 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CDH20Q9HBT6 801 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 NRIP3Q9NQ35 241 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 RPRD1BQ9NQG5 326 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 POLE4Q9NR33 117 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CA10Q9NS85 328 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CBLN4Q9NTU7 201 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 FAIMQ9NVQ4 179 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 PDP1Q9P0J1 537 aaPredicted RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 MYEF2Q9P2K5 600 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 STX18Q9P2W9 335 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 PCDHGB5Q9Y5G0 923 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 CDH10Q9Y6N8 788 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 RTTNQ86VV8 2226 aa4.18□□□□□ -1.74
VPS41-205ENST00000414632 YLPM1P49750 1951 aaKnown RBP4.18□□□□□ -1.74
VPS41-205ENST00000414632 NIPBLQ6KC79 2804 aaeCLIP4.17□□□□□ -1.74
VPS41-205ENST00000414632 ANK3Q12955 4377 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 TANC2Q9HCD6 1990 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 LOC100509620A0A075B734 347 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 IQCMA0A1B0GVH7 501 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 TMEM129A0AVI4 362 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 C5orf49A4QMS7 147 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 TVP23AA6NH52 213 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 FAM183AA6NL82 134 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 A8MV72 311 aaPredicted RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 H7C1Q1 480 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 IFNL4K9M1U5 179 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 OVOL3O00110 214 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 BHLHE40O14503 412 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 PAGE4O60829 102 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 KHDRBS3O75525 346 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 CIB2O75838 187 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ATP5HO75947 161 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 TXNDC12O95881 172 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CLPTM1O96005 669 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 RENP00797 406 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 IL1AP01583 271 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SERPINA5P05154 406 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 LCKP06239 509 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 HEXAP06865 529 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CST2P09228 141 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CLUP10909 449 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 PSKH1P11801 424 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 NR2C1P13056 603 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF35P13682 527 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 CD99P14209 185 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 NPR2P20594 1047 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 MSR1P21757 451 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 STOMP27105 288 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 APLNRP35414 380 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 WNT5AP41221 380 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 RPS27P42677 84 aaKnown RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 GUCA1AP43080 201 aaPredicted RBP4.17□□□□□ -1.74
VPS41-205ENST00000414632 ALDH3B1P43353 468 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 SOX2P48431 317 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 RASSF2P50749 326 aa4.17□□□□□ -1.74
VPS41-205ENST00000414632 ZNF133P52736 654 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms