RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 NICN1Q9BSH3 213 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 EGLN1Q9GZT9 426 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 MOB1AQ9H8S9 216 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 SMCO4Q9NRQ5 59 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 SOHLH2Q9NX45 425 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 FAM96BQ9Y3D0 163 aa15.65■□□□□ 0.1
SDCBP-202ENST00000413219 A0A0A6YYD4 124 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 COLCA2A8K830 154 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MFNGO00587 321 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 THEGLP0DJG4 465 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 FASLGP48023 281 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 SULT1A2P50226 295 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 NPY4RP50391 375 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 RAB5BP61020 215 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 HTRA3P83110 453 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 FOXK1P85037 733 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 SLC9A3R2Q15599 337 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 H1FNTQ75WM6 255 aaPredicted RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM200AQ86VY9 491 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 LHFPL1Q86WI0 220 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 OR10H5Q8NGA6 315 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MFSD8Q8NHS3 518 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 NECAB3Q96P71 396 aaPredicted RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 OR5B2Q96R09 309 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 IGFLR1Q9H665 355 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 ASH2LQ9UBL3 628 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 PISDQ9UG56 409 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MRPS28Q9Y2Q9 187 aaKnown RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 LILRA5A6NI73 299 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 FBXO24O75426 580 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 FARS2O95363 451 aaKnown RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 SFTA3P0C7M3 94 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 ZNF20P17024 532 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 NFYBP25208 207 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 SWI5Q1ZZU3 235 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 ANKRD55Q3KP44 614 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 BTNL8Q6UX41 500 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 SLC29A4Q7RTT9 530 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MISPQ8IVT2 679 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 C15orf54Q8N8G6 183 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 OR5H2Q8NGV7 314 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 RHBDD1Q8TEB9 315 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 DAZLQ92904 295 aaKnown RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 C1orf147Q96MC9 270 aaPredicted RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 RTBDNQ9BSG5 229 aaPredicted RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MTIF3Q9H2K0 278 aaKnown RBP15.64■□□□□ 0.09
SDCBP-202ENST00000413219 MEMO1Q9Y316 297 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 FREM3P0C091 2139 aa15.64■□□□□ 0.09
SDCBP-202ENST00000413219 COL5A1P20908 1838 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-202ENST00000413219 IGKV1D-43A0A0B4J1Z2 117 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 FIGNL2A6NMB9 653 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 FCGR3AP08637 254 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 DRD1P21728 446 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 RAB32Q13637 225 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 PLAC9Q5JTB6 97 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 GLIPR1L1Q6UWM5 242 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 ZNF441Q8N8Z8 693 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 C11orf40Q8WZ69 217 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 ZNF775Q96BV0 537 aaPredicted RBP15.63■□□□□ 0.09
SDCBP-202ENST00000413219 MVB12AQ96EY5 273 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 LRRC61Q9BV99 259 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 FOXQ1Q9C009 403 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 METTL8Q9H825 291 aaKnown RBP15.63■□□□□ 0.09
SDCBP-202ENST00000413219 TAF9BQ9HBM6 251 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 PARP11Q9NR21 331 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 CUTCQ9NTM9 273 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 TCRBV21S2A2A0A5A6 115 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 TLCD2A6NGC4 264 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 CDC14BO60729 498 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 GABRG2P18507 467 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 IL11P20809 199 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 LPAR6P43657 344 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 HSF1Q00613 529 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 KIAA0895LQ68EN5 471 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 RTN4RL2Q86UN3 420 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 BHLHE23Q8NDY6 225 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 OR56B1Q8NGI3 324 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 ST8SIA1Q92185 356 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM41AQ96HV5 264 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 OR10C1Q96KK4 312 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 OR2S2Q9NQN1 319 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 KLHL13Q9P2N7 655 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 COPS7AQ9UBW8 275 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 OSGIN2Q9Y236 505 aa15.63■□□□□ 0.09
SDCBP-202ENST00000413219 IGHV5-51A0A0C4DH38 117 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 SOCS1O15524 211 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 LRP3O75074 770 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 MED6O75586 246 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 MPIG6BO95866 241 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 S100A8P05109 93 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 ADH6P28332 368 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 HMGN3Q15651 99 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 OR5AS1Q8N127 324 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 KDF1Q8NAX2 398 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-202ENST00000413219 C2CD4CQ8TF44 421 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 CPNE2Q96FN4 548 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-202ENST00000413219 TMEM59Q9BXS4 323 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.62■□□□□ 0.09
SDCBP-202ENST00000413219 CHST11Q9NPF2 352 aa15.62■□□□□ 0.09
SDCBP-202ENST00000413219 PCDHGA1Q9Y5H4 931 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms