RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NDUFB11Q9NX14 153 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 ARFGEF3Q5TH69 2177 aa17.6■□□□□ 0.41
VSX1-203ENST00000409285 A0A1B0GTI1 187 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 hCG_38984A0A1B0GV85 526 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 ATE1O95260 518 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 TFAP2AP05549 437 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 RAC2P15153 192 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 ACHEP22303 614 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 COL8A1P27658 744 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 PSMB9P28065 219 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 ZNF672Q499Z4 452 aaPredicted RBP17.59■□□□□ 0.41
VSX1-203ENST00000409285 YIF1BQ5BJH7 314 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 RGS7BPQ6MZT1 257 aaPredicted RBP17.59■□□□□ 0.41
VSX1-203ENST00000409285 PHC2Q8IXK0 858 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 ZNF676Q8N7Q3 588 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 OR2AE1Q8NHA4 323 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 OR51E1Q8TCB6 317 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 KLF14Q8TD94 323 aaPredicted RBP17.59■□□□□ 0.41
VSX1-203ENST00000409285 GHSRQ92847 366 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 LYZL4Q96KX0 146 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 POFUT1Q9H488 388 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 POU2F3Q9UKI9 436 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 ZNF281Q9Y2X9 895 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 N6AMT1Q9Y5N5 214 aa17.59■□□□□ 0.41
VSX1-203ENST00000409285 SETXQ7Z333 2677 aaKnown RBP17.59■□□□□ 0.41
VSX1-203ENST00000409285 IGLV3-9A0A075B6K5 115 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 LOC107986453A0A1B0GWG9 222 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 CCRL2O00421 344 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 ZNF12P17014 697 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 ERVS71-1P61550 626 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 FAM3AP98173 230 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 OR8B8Q15620 311 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 ZNF718Q3SXZ3 478 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 LIPKQ5VXJ0 399 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 PGAP1Q75T13 922 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 DOK3Q7L591 496 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 LILRB1Q8NHL6 650 aaPredicted RBP17.58■□□□□ 0.41
VSX1-203ENST00000409285 PTTG3PQ9NZH4 202 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 HHLA2Q9UM44 414 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 ATP23Q9Y6H3 246 aa17.58■□□□□ 0.41
VSX1-203ENST00000409285 E7EQL1 145 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 P2RY10O00398 339 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 MTRF1O75570 445 aaKnown RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 DHRS3O75911 302 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 PLAUP00749 431 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 PSMA1P25786 263 aaKnown RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 THBS4P35443 961 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 ALDH3B2P48448 385 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 SLC3A1Q07837 685 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 TRAM1Q15629 374 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 SSX1Q16384 188 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 TSTQ16762 297 aaKnown RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 KRT74Q7RTS7 529 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 MRPL21Q7Z2W9 205 aaKnown RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 MS4A15Q8N5U1 240 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 RGP1Q92546 391 aaPredicted RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 MRPL24Q96A35 216 aaKnown RBP17.57■□□□□ 0.4
VSX1-203ENST00000409285 DSCAMO60469 2012 aa17.57■□□□□ 0.4
VSX1-203ENST00000409285 A0A1B0GVI7 797 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SYT7O43581 403 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 CTAG2O75638 210 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 IGHV3-13P01766 116 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 KITLGP21583 273 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 GABRA5P31644 462 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 LIPAP38571 399 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 RPS11P62280 158 aaKnown RBP eCLIP17.56■□□□□ 0.4
VSX1-203ENST00000409285 BLMHQ13867 455 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 HLXQ14774 488 aaPredicted RBP17.56■□□□□ 0.4
VSX1-203ENST00000409285 ADIPOQQ15848 244 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 MSMPQ1L6U9 139 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 GFOD2Q3B7J2 385 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SPATA46Q5T0L3 261 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 ZBTB37Q5TC79 503 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 HAVCR1Q96D42 359 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 C14orf79Q96F83 325 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 DHRS9Q9BPW9 319 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SF3B6Q9Y3B4 125 aaKnown RBP17.56■□□□□ 0.4
VSX1-203ENST00000409285 CMAHPQ9Y471 501 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 V9GYS6 101 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 CHD3Q12873 2000 aaKnown RBP17.56■□□□□ 0.4
VSX1-203ENST00000409285 PNMA8CA0A1B0GUJ8 204 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 VSTM5A8MXK1 200 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SC5DO75845 299 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SELEP16581 610 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 GCH1P30793 250 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 DDOSTP39656 456 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 EVX1P49640 407 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 GSK3AP49840 483 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 TNK1Q13470 666 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 ODF4Q2M2E3 257 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 HIST2H2BCQ6DN03 193 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 RDH10Q8IZV5 341 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 OR13F1Q8NGS4 319 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 SYNPRQ8TBG9 265 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 GPR148Q8TDV2 347 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 THRSPQ92748 146 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 C10orf35Q96D05 121 aa17.56■□□□□ 0.4
VSX1-203ENST00000409285 CISD1Q9NZ45 108 aaKnown RBP17.56■□□□□ 0.4
VSX1-203ENST00000409285 TRBV5-5A0A0J9YX44 114 aa17.55■□□□□ 0.4
VSX1-203ENST00000409285 A0A1W2PPR1 153 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms