RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 BTLAQ7Z6A9 289 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 STARD4Q96DR4 205 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 BOD1Q96IK1 185 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 RGCCQ9H4X1 137 aa18.28■□□□□ 0.52
TPM1-208ENST00000404484 LCATP04180 440 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 MAS1P04201 325 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 PPP5CP53041 499 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 P2RY6Q15077 328 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 GSG1Q2KHT4 349 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 HIKESHIQ53FT3 197 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 SFRP5Q5T4F7 317 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 C16orf87Q6PH81 154 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 BEND4Q6ZU67 534 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 NKAIN3Q8N8D7 197 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 PLPP7Q8NBV4 271 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 OR5D14Q8NGL3 314 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 FGGYQ96C11 551 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 FAM71F1Q96KD3 344 aaPredicted RBP18.27■□□□□ 0.52
TPM1-208ENST00000404484 PSMG3-AS1Q96PY0 264 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 PLEKHA1Q9HB21 404 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 TAS2R4Q9NYW5 299 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 ZNF319Q9P2F9 582 aa18.27■□□□□ 0.52
TPM1-208ENST00000404484 UTP20O75691 2785 aaKnown RBP18.27■□□□□ 0.52
TPM1-208ENST00000404484 ADRA2CP18825 462 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 ATF1P18846 271 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 CFPP27918 469 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 HOXC12P31275 282 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 CEACAM8P31997 349 aaPredicted RBP18.26■□□□□ 0.51
TPM1-208ENST00000404484 GFOD2Q3B7J2 385 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 GLT8D1Q68CQ7 371 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 Q6ZSR3 168 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 PGAP1Q75T13 922 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 NAA40Q86UY6 237 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 DOLPP1Q86YN1 238 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 CPEB3Q8NE35 698 aaKnown RBP18.26■□□□□ 0.51
TPM1-208ENST00000404484 ZNF671Q8TAW3 534 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 TRMT10AQ8TBZ6 339 aaKnown RBP18.26■□□□□ 0.51
TPM1-208ENST00000404484 C10orf35Q96D05 121 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 MIXL1Q9H2W2 232 aa18.26■□□□□ 0.51
TPM1-208ENST00000404484 SETXQ7Z333 2677 aaKnown RBP18.26■□□□□ 0.51
TPM1-208ENST00000404484 LOC390937A0A1W2PQ73 354 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 DHRS7CA6NNS2 312 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 CCL21O00585 134 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 DHRS3O75911 302 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 TOXO94900 526 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 CGAP01215 116 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 ERCC1P07992 297 aaPredicted RBP18.25■□□□□ 0.51
TPM1-208ENST00000404484 STOMP27105 288 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 GNALP38405 381 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 RANBP1P43487 201 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 CASP6P55212 293 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 SCAND1P57086 179 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 GABRG1Q8N1C3 465 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 C17orf78Q8N4C9 275 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 OR1J2Q8NGS2 313 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 DIRAS2Q96HU8 199 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 GFI1Q99684 422 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 B3GNT2Q9NY97 397 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 J3QRK9 145 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 XRCC2O43543 280 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 HPGDSO60760 199 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 RAD51DO75771 328 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 GLI4P10075 376 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 CALCBP10092 127 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 SLC2A2P11168 524 aaPredicted RBP18.25■□□□□ 0.51
TPM1-208ENST00000404484 APLNRP35414 380 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 DDOSTP39656 456 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 GABRA6Q16445 453 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 SNAI3Q3KNW1 292 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 METAP1DQ6UB28 335 aaPredicted RBP18.25■□□□□ 0.51
TPM1-208ENST00000404484 LRRC28Q86X40 367 aaPredicted RBP18.25■□□□□ 0.51
TPM1-208ENST00000404484 OR14K1Q8NGZ2 314 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 FOXRED1Q96CU9 486 aaPredicted RBP18.25■□□□□ 0.51
TPM1-208ENST00000404484 CMTM3Q96MX0 182 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 C1QTNF5Q9BXJ0 243 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 V9GYS6 101 aa18.25■□□□□ 0.51
TPM1-208ENST00000404484 ZG16O60844 167 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 LYZL6O75951 148 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 HES5Q5TA89 166 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 ASPHD2Q6ICH7 369 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 C3P1Q6ZMU1 363 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 SAMD12Q8N8I0 201 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 ZNF610Q8N9Z0 462 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 AKAP1Q92667 903 aaKnown RBP eCLIP18.24■□□□□ 0.51
TPM1-208ENST00000404484 ITFG2Q969R8 447 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 ADAT3Q96EY9 351 aaPredicted RBP18.24■□□□□ 0.51
TPM1-208ENST00000404484 NOX3Q9HBY0 568 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 OBP2BQ9NPH6 170 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 SPATA2Q9UM82 520 aa18.24■□□□□ 0.51
TPM1-208ENST00000404484 ZNF503-AS2A6NEH8 195 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 FAM25AB3EWG3 89 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 FAM25CB3EWG5 89 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 FAM25GB3EWG6 89 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 LMX1BO60663 402 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 RAB3AP20336 220 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 PTBP1P26599 531 aaKnown RBP eCLIP18.23■□□□□ 0.515e-7■■■□□ 15.6
TPM1-208ENST00000404484 BDKRB2P30411 391 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 OPRM1P35372 400 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 THBS4P35443 961 aa18.23■□□□□ 0.51
TPM1-208ENST00000404484 TALDO1P37837 337 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms