RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 NEDD8Q15843 81 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 PGAP1Q75T13 922 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 DOK3Q7L591 496 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF295-AS1Q8N0V1 137 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 MS4A15Q8N5U1 240 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF676Q8N7Q3 588 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZFP41Q8N8Y5 198 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 OR2AE1Q8NHA4 323 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 SYNPRQ8TBG9 265 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 OR51E1Q8TCB6 317 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-201ENST00000404210 GHSRQ92847 366 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 UFD1Q92890 307 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 MUL1Q969V5 352 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 LYZL4Q96KX0 146 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 OPALINQ96PE5 141 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF281Q9Y2X9 895 aa10.58□□□□□ -0.72
LINC00339-201ENST00000404210 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 A0A1B0GVI7 797 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 P2RY10O00398 339 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 SYT7O43581 403 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 IGHV3-13P01766 116 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 KITLGP21583 273 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 ACHEP22303 614 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 PSMB9P28065 219 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 SLC3A1Q07837 685 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 PSG7Q13046 419 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 HLXQ14774 488 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-201ENST00000404210 MOGQ16653 247 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 SPATA46Q5T0L3 261 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 VHLLQ6RSH7 139 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 MRPL21Q7Z2W9 205 aaKnown RBP10.57□□□□□ -0.72
LINC00339-201ENST00000404210 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 NEUROG1Q92886 237 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 MRPL24Q96A35 216 aaKnown RBP10.57□□□□□ -0.72
LINC00339-201ENST00000404210 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 PDCD1LG2Q9BQ51 273 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 GPR84Q9NQS5 396 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 SCOCQ9UIL1 159 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 HHLA2Q9UM44 414 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 FLNCQ14315 2725 aa10.57□□□□□ -0.72
LINC00339-201ENST00000404210 hCG_38984A0A1B0GV85 526 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 GGT3PA6NGU5 568 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 CCRL2O00421 344 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 HS3ST1O14792 307 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 DHRS3O75911 302 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 TFAP2AP05549 437 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 OR4A8P0C604 315 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 SERPINF1P36955 418 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 MPV17P39210 176 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 MAP2K3P46734 347 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 GSK3AP49840 483 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 OR8B8Q15620 311 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 TRAM1Q15629 374 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 ADIPOQQ15848 244 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 TSTQ16762 297 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 ODF4Q2M2E3 257 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 GFOD2Q3B7J2 385 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 YIF1BQ5BJH7 314 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 LIPKQ5VXJ0 399 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 KRT74Q7RTS7 529 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 CSNK2A3Q8NEV1 391 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 OR14K1Q8NGZ2 314 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 GPR148Q8TDV2 347 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 FBXW5Q969U6 566 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 C10orf35Q96D05 121 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 SOX7Q9BT81 388 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 MRPL37Q9BZE1 423 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 DUSP13Q9UII6 198 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 PURGQ9UJV8 347 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 SF3B6Q9Y3B4 125 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 V9GYS6 101 aa10.56□□□□□ -0.72
LINC00339-201ENST00000404210 ANKHD1Q8IWZ3 2542 aaKnown RBP10.56□□□□□ -0.72
LINC00339-201ENST00000404210 PKDREJQ9NTG1 2253 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 PNMA8CA0A1B0GUJ8 204 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 LOC107986453A0A1B0GWG9 222 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 CD300LBA8K4G0 201 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 IQCF6A8MYZ5 107 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 B9A039 149 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 PSMA1P25786 263 aaKnown RBP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 SSTR2P30874 369 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 TTKP33981 857 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 LIPAP38571 399 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 RPL5P46777 297 aaKnown RBP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 ALDH3B2P48448 385 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 KLF3P57682 345 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 RPS11P62280 158 aaKnown RBP eCLIP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 RIPPLY1Q0D2K3 151 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 TNK1Q13470 666 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 EFNB3Q15768 340 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 SSX1Q16384 188 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 ZBTB37Q5TC79 503 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms