RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SPRED1Q7Z699 444 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 TMEM30AQ9NV96 361 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 NUP214P35658 2090 aaPredicted RBP8.47□□□□□ -1.05
ATL3-201ENST00000398868 TMEM212A6NML5 194 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ZNF487B1APH4 448 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 PAPLNO95428 1278 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ZNF26P17031 533 aaPredicted RBP8.47□□□□□ -1.05
ATL3-201ENST00000398868 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ZNF620Q6ZNG0 422 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 GPR32P1Q8NGA4 272 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 SLC25A46Q96AG3 418 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 KIR3DX1Q9H7L2 352 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 PPM1DO15297 605 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 KCNAB3O43448 404 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 SLC25A6P12236 298 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 GABRB1P18505 474 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 PTBP1P26599 531 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATL3-201ENST00000398868 SLC35A4Q96G79 324 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 IER2Q9BTL4 223 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 BARHL1Q9BZE3 327 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 OR52A1Q9UKL2 312 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ZNF207O43670 478 aaKnown RBP8.47□□□□□ -1.05
ATL3-201ENST00000398868 IGHEP01854 428 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 S100A8P05109 93 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 OPRD1P41143 372 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 MTNR1BP49286 362 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 REEP5Q00765 189 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 FOXK2Q01167 660 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ALKBH1Q13686 389 aaKnown RBP8.47□□□□□ -1.05
ATL3-201ENST00000398868 C20orf196Q8IYI0 205 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 FAM24BQ8N5W8 94 aa8.47□□□□□ -1.05
ATL3-201ENST00000398868 ZNF346Q9UL40 294 aaKnown RBP8.47□□□□□ -1.05
ATL3-201ENST00000398868 SH2D7A6NKC9 451 aaPredicted RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 CRYAAP02489 173 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 GLB1P16278 677 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ZNF25P17030 456 aaPredicted RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 HENMT1Q5T8I9 393 aaKnown RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 PRSS41Q7RTY9 318 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 OR56B1Q8NGI3 324 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 OR10J5Q8NHC4 309 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 KISS1RQ969F8 398 aaPredicted RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 SOX7Q9BT81 388 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 SPNS1Q9H2V7 528 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 RIMS4Q9H426 269 aaPredicted RBP8.46□□□□□ -1.05
ATL3-201ENST00000398868 CHODLQ9H9P2 273 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 OR1A1Q9P1Q5 309 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 LAMA4Q16363 1823 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ABCD4O14678 606 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 RAB29O14966 203 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 TCF21O43680 179 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 AQP8O94778 261 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 RGS11O94810 467 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ATP1B1P05026 303 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 KIR2DL3P43628 341 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ABHD17CQ6PCB6 329 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 DHRS11Q6UWP2 260 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 NPEPL1Q8NDH3 523 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 MBOAT4Q96T53 435 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 SMIM7Q9BQ49 75 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 RAB9BQ9NP90 201 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ACOXLQ9NUZ1 547 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 NECAP2Q9NVZ3 263 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 A0A1B0GUL6 1792 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.05
ATL3-201ENST00000398868 ACSM4P0C7M7 580 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 HAAOP46952 286 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 MOGAT2Q3SYC2 334 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 CATSPERDQ86XM0 798 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 ZNF573Q86YE8 665 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 DTWD2Q8NBA8 298 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR1J1Q8NGS3 322 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 WDR89Q96FK6 387 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 GPR55Q9Y2T6 319 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 ASB1Q9Y576 335 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 HS3ST3A1Q9Y663 406 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR5H15A6NDH6 313 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR5H1A6NKK0 313 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 DBX1A6NMT0 343 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 MASP2O00187 686 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 CDK5Q00535 292 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 ZNF92Q03936 586 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 GAMTQ14353 236 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 TCTN1Q2MV58 587 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 SIGIRRQ6IA17 410 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 TEX261Q6UWH6 196 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 U3KQ87 197 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 XRCC2O43543 280 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 DOC2BQ14184 412 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 LHX8Q68G74 356 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 SLC48A1Q6P1K1 146 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 PLXDC2Q6UX71 529 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 ZNF66Q6ZN08 573 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 TMPRSS13Q9BYE2 586 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 IGHV3-43A0A0B4J1X8 118 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms