RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MAGEB3O15480 346 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 SULT1B1O43704 296 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 ERCC1P07992 297 aaPredicted RBP7.52□□□□□ -1.21
TDP1-203ENST00000393454 HCKP08631 526 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 CSF3P09919 207 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 C1QTNF9P0C862 333 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 FAHP16930 419 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 IGHV1-2P23083 117 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 POU3F4P49335 361 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
TDP1-203ENST00000393454 SCN1BQ07699 218 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 GUSBP1Q15486 140 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 GSG1Q2KHT4 349 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 C2orf76Q3KRA6 126 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 KRTAP27-1Q3LI81 207 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 RNASE12Q5GAN4 147 aaKnown RBP7.52□□□□□ -1.21
TDP1-203ENST00000393454 RTL6Q6ICC9 239 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 DCDC5Q6ZRR9 648 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 Q6ZT83 130 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 DPPA2Q7Z7J5 298 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 C19orf18Q8NEA5 215 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 OR52N4Q8NGI2 321 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 FOXRED1Q96CU9 486 aaPredicted RBP7.52□□□□□ -1.21
TDP1-203ENST00000393454 ZFP3Q96NJ6 502 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 SORCS2Q96PQ0 1159 aa7.52□□□□□ -1.21
TDP1-203ENST00000393454 LOC100509620A0A075B734 347 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 LOC100289279A0A1B0GTE1 492 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 A0A1W2PR80 420 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MBD3L4A6NDZ8 208 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 MBD3L3A6NE82 208 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 MBD3L5A6NJ08 208 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 IL2RAP01589 272 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 IGLV3-1P01715 115 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 TMIGD3P0DMS9 266 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 ARSBP15848 533 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PTGER4P35408 488 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 APLNRP35414 380 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 THBS4P35443 961 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PLA2G5P39877 138 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PRSS12P56730 875 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PITPNAQ00169 270 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 TSC22D1Q15714 1073 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 LINC00303Q3SY05 128 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 DMRTC1Q5HYR2 192 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PYHIN1Q6K0P9 492 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 GFRALQ6UXV0 394 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 Q6ZNX1 250 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MDP1Q86V88 176 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 Q8NA96 180 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 CCDC54Q8NEL0 328 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 SEMA6DQ8NFY4 1073 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 OR6M1Q8NGM8 313 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 FAM57AQ8TBR7 257 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 NPRL2Q8WTW4 380 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RAB40AQ8WXH6 277 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 SLC25A38Q96DW6 304 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 COX4I2Q96KJ9 171 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 SPACA5Q96QH8 159 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 OPN3Q9H1Y3 402 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 KCNK15Q9H427 330 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RHBDL2Q9NX52 303 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MYEF2Q9P2K5 600 aaKnown RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 ATPIF1Q9UII2 106 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 V9GYS6 101 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 TMEM272A0A1B0GTI8 110 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 EEF1E1O43324 174 aaKnown RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 COX5BP10606 129 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 HOXC12P31275 282 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 ZNF93P35789 620 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 MAP2K3P46734 347 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 SCAND1P57086 179 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RIPPLY1Q0D2K3 151 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PLA2G7Q13093 441 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RIN1Q13671 783 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 C1orf100Q5SVJ3 147 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 TMEM69Q5SWH9 247 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 ZNF57Q68EA5 555 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 ZNF324BQ6AW86 544 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 BAIAP2L2Q6UXY1 529 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 SEM1Q6ZVN7 128 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RPRMLQ8N4K4 120 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 ZNF610Q8N9Z0 462 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MINDY2Q8NBR6 621 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 AKAP1Q92667 903 aaKnown RBP eCLIP7.51□□□□□ -1.21
TDP1-203ENST00000393454 SLC25A28Q96A46 364 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PHF21AQ96BD5 680 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 STARD4Q96DR4 205 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 MS4A3Q96HJ5 214 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 ABHD1Q96SE0 405 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 GPER1Q99527 375 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 CNTD2Q9H8S5 307 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 PLSCR4Q9NRQ2 329 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 B3GNT2Q9NY97 397 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 FAM215AQ9Y5M1 114 aa7.51□□□□□ -1.21
TDP1-203ENST00000393454 RP1L1Q8IWN7 2480 aaPredicted RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 INTS1Q8N201 2190 aaKnown RBP7.51□□□□□ -1.21
TDP1-203ENST00000393454 PRRG2O14669 202 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 XRCC2O43543 280 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 TNFSF13O75888 250 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms