RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SLC7A10Q9NS82 523 aa22.06■■□□□ 1.12
SHOX2-201ENST00000389589 TAS2R8Q9NYW2 309 aa22.06■■□□□ 1.12
SHOX2-201ENST00000389589 MTFP1Q9UDX5 166 aa22.06■■□□□ 1.12
SHOX2-201ENST00000389589 METTL21EPA6NDL7 271 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 ZNF587BE7ETH6 402 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 PRSS3P35030 304 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 PSG4Q00888 419 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 SSBP1Q04837 148 aaKnown RBP22.05■■□□□ 1.12
SHOX2-201ENST00000389589 CAMK2BQ13554 666 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 OLFML2AQ68BL7 652 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 SKA3Q8IX90 412 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 WDYHV1Q96HA8 205 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 NUDT15Q9NV35 164 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 FBLN5Q9UBX5 448 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 RAG2P55895 527 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 RAB12Q6IQ22 244 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 PP6455Q8WZ26 134 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 APH1AQ96BI3 265 aa22.05■■□□□ 1.12
SHOX2-201ENST00000389589 MRPL15Q9P015 296 aaKnown RBP22.05■■□□□ 1.12
SHOX2-201ENST00000389589 C5orf63A6NC05 138 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 SULT1C2O00338 296 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 ALX3O95076 343 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 HTR5AP47898 357 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 TBRG1Q3YBR2 411 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 RIF1Q5UIP0 2472 aaKnown RBP22.04■■□□□ 1.12
SHOX2-201ENST00000389589 BTN2A1Q7KYR7 527 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 ACTR6Q9GZN1 396 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 WNT5BQ9H1J7 359 aa22.04■■□□□ 1.12
SHOX2-201ENST00000389589 IGHV3-9P01782 118 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 PMPCAQ10713 525 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 C3AR1Q16581 482 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 AKR7LQ8NHP1 331 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 SPRR3Q9UBC9 169 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 CSAG2Q9Y5P2 127 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 ARHGAP21Q5T5U3 1957 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 FREM1Q5H8C1 2179 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 TRAV17A0A0B4J275 112 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 DHRS7CA6NNS2 312 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 SCGNO76038 276 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 HCKP08631 526 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 CSF1P09603 554 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 CCR6P51684 374 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 DEFB109BQ30KR1 87 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 PLXDC2Q6UX71 529 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 UTS2BQ765I0 119 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 ZNF627Q7L945 461 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 CDH24Q86UP0 819 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 ST6GAL2Q96JF0 529 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 ATPIF1Q9UII2 106 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 ZNF391Q9UJN7 358 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 RTTNQ86VV8 2226 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 MUC6Q6W4X9 2439 aa22.03■■□□□ 1.12
SHOX2-201ENST00000389589 MMP7P09237 267 aaPredicted RBP22.02■■□□□ 1.12
SHOX2-201ENST00000389589 FAUP35544 74 aaKnown RBP22.02■■□□□ 1.12
SHOX2-201ENST00000389589 QRFPP83859 136 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 ARF1P84077 181 aaKnown RBP22.02■■□□□ 1.12
SHOX2-201ENST00000389589 AWAT2Q6E213 333 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 ANGPTL5Q86XS5 388 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 SGK3Q96BR1 496 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 SCPEP1Q9HB40 452 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 GP6Q9HCN6 339 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 UPB1Q9UBR1 384 aa22.02■■□□□ 1.12
SHOX2-201ENST00000389589 TRAV6A0A075B6T7 132 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 PATE4P0C8F1 98 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 SNAI3Q3KNW1 292 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 ATAD3CQ5T2N8 411 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 OR10K2Q6IF99 312 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 OR2W3Q7Z3T1 314 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 FAM46BQ96A09 425 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF175Q9Y473 711 aa22.02■■□□□ 1.11
SHOX2-201ENST00000389589 PRF1P14222 555 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 HOXD11P31277 338 aaPredicted RBP22.01■■□□□ 1.11
SHOX2-201ENST00000389589 RAB25P57735 213 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 SFRP5Q5T4F7 317 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 PAQR4Q8N4S7 273 aaPredicted RBP22.01■■□□□ 1.11
SHOX2-201ENST00000389589 OR56B4Q8NH76 319 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 FGFBP3Q8TAT2 258 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 SSC4DQ8WTU2 575 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 CHST5Q9GZS9 411 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 MYEF2Q9P2K5 600 aaKnown RBP22.01■■□□□ 1.11
SHOX2-201ENST00000389589 PIGLQ9Y2B2 252 aa22.01■■□□□ 1.11
SHOX2-201ENST00000389589 MRPS28Q9Y2Q9 187 aaKnown RBP22.01■■□□□ 1.11
SHOX2-201ENST00000389589 PROB1E7EW31 1015 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 GMDSO60547 372 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 CEACAM4O75871 244 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 IGHG3P01860 377 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 H2AFB2P0C5Z0 115 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 VSIG8P0DPA2 414 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 FCGR2AP12318 317 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF24P17028 368 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 PCGF3Q3KNV8 242 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 ZNF100Q8IYN0 542 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 GPX8Q8TED1 209 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 LCATP04180 440 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 UBBP0CG47 229 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 PSMB1P20618 241 aaKnown RBP22■■□□□ 1.11
SHOX2-201ENST00000389589 ACTBP60709 375 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 ACTG1P63261 375 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 UNC119Q13432 240 aa22■■□□□ 1.11
SHOX2-201ENST00000389589 AKAP1Q92667 903 aaKnown RBP eCLIP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms