RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 DCUN1D4Q92564 292 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 MOGAT1Q96PD6 335 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 SPSB2Q99619 263 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 NUDT16L1Q9BRJ7 211 aaKnown RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 ADAT1Q9BUB4 502 aaKnown RBP7.96□□□□□ -1.14
GPNMB-202ENST00000381990 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 KCNG2Q9UJ96 466 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 EDARQ9UNE0 448 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 CSAG2Q9Y5P2 127 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 USP34Q70CQ2 3546 aa7.96□□□□□ -1.14
GPNMB-202ENST00000381990 WDR87Q6ZQQ6 2873 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 F13BP05160 661 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 FAM157CP0CG43 387 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 PGCP20142 388 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 GSK3AP49840 483 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 LPAL2Q16609 132 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 NKPD1Q17RQ9 610 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 C1orf100Q5SVJ3 147 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 CPEB2Q7Z5Q1 589 aaKnown RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 MISPQ8IVT2 679 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 NUDCD2Q8WVJ2 157 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 SMIM8Q96KF7 97 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 WDR77Q9BQA1 342 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 CRB3Q9BUF7 120 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 SYT4Q9H2B2 425 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 ACKR4Q9NPB9 350 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 RAB22AQ9UL26 194 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 BDP1A6H8Y1 2624 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 C5orf51A6NDU8 294 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 TMEM235A6NFC5 223 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 C4orf47A7E2U8 309 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 ZNF705EA8MWA4 302 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 UBE2CO00762 179 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 XKRYO14609 159 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 ZNF883P0CG24 379 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 SP9P0CG40 484 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 PET100P0DJ07 73 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 LYL1P12980 280 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 PTAFRP25105 342 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 AVPR2P30518 371 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 RIDAP52758 137 aaKnown RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 HMGN3Q15651 99 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 GFOD2Q3B7J2 385 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 ZNF524Q96C55 264 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 SLC25A44Q96H78 314 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 KLHDC3Q9BQ90 382 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 MESP1Q9BRJ9 268 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 SEC61A2Q9H9S3 476 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 RHOFQ9HBH0 211 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 CYTL1Q9NRR1 136 aa7.95□□□□□ -1.14
GPNMB-202ENST00000381990 C19orf25Q9UFG5 118 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 MRPS18BQ9Y676 258 aaKnown RBP7.95□□□□□ -1.14
GPNMB-202ENST00000381990 TRBV11-1A0A0K0K1C0 115 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 COLCA2A8K830 154 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 C1orf196B1AJZ1 125 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 EFSO43281 561 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 ISG15P05161 165 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 FABP1P07148 127 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 ERCC1P07992 297 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-202ENST00000381990 ACAA1P09110 424 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-202ENST00000381990 GP1BBP13224 206 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 VAMP1P23763 118 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 PTGFRP43088 359 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 SRSF3P84103 164 aaKnown RBP7.94□□□□□ -1.14
GPNMB-202ENST00000381990 EGR4Q05215 589 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 ZNF260Q3ZCT1 412 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 LCN10Q6JVE6 187 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
GPNMB-202ENST00000381990 CD163Q86VB7 1156 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 CATSPERDQ86XM0 798 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 ADAMTS17Q8TE56 1095 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 C2CD4CQ8TF44 421 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TMED6Q8WW62 240 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 AQP10Q96PS8 301 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 CMKLR1Q99788 373 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 WDR54Q9H977 334 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TAS2R4Q9NYW5 299 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 NXT1Q9UKK6 140 aaKnown RBP7.94□□□□□ -1.14
GPNMB-202ENST00000381990 HHLA2Q9UM44 414 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TMED7Q9Y3B3 224 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 EXPH5Q8NEV8 1989 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 C5orf52A6NGY3 159 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 EEF1E1-BLOC1S5C9J1V9 151 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 H7C1C5 153 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TAAR5O14804 337 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 SGCEO43556 437 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 NUDT14O95848 222 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 IFNA6P05013 189 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 S100A6P06703 90 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 CXCR1P25024 350 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 MPLP40238 635 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 DNASE1L1P49184 302 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 SLC26A5P58743 744 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 LCN6P62502 163 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TMEM128Q5BJH2 165 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 CORO6Q6QEF8 472 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 LRRC69Q6ZNQ3 347 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 RHOUQ7L0Q8 258 aa7.94□□□□□ -1.14
GPNMB-202ENST00000381990 TRAPPC6BQ86SZ2 158 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms