RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 MS4A3Q96HJ5 214 aa17.04■□□□□ 0.32
CCM2-202ENST00000381112 RGCCQ9H4X1 137 aa17.04■□□□□ 0.32
CCM2-202ENST00000381112 PALMDQ9NP74 551 aa17.04■□□□□ 0.32
CCM2-202ENST00000381112 SPTA1P02549 2419 aa17.04■□□□□ 0.32
CCM2-202ENST00000381112 ITPR1Q14643 2758 aa17.04■□□□□ 0.32
CCM2-202ENST00000381112 MTRF1O75570 445 aaKnown RBP17.03■□□□□ 0.32
CCM2-202ENST00000381112 ELK1P19419 428 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 ZNF474Q6S9Z5 364 aaPredicted RBP17.03■□□□□ 0.32
CCM2-202ENST00000381112 WDR31Q8NA23 367 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 OR1M1Q8NGA1 313 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 ZNF671Q8TAW3 534 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 LIN7BQ9HAP6 207 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 PLEKHA1Q9HB21 404 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 ADAM30Q9UKF2 790 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 SPATA2Q9UM82 520 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 RTTNQ86VV8 2226 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 ZNF14P17017 642 aaPredicted RBP17.03■□□□□ 0.32
CCM2-202ENST00000381112 CCNOP22674 350 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 APLNRP35414 380 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 CLDN12P56749 244 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 GLT8D1Q68CQ7 371 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 FAM166AQ6J272 317 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 C16orf87Q6PH81 154 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 CNIH2Q6PI25 160 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 PGAP1Q75T13 922 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 LYPD6Q86Y78 171 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 C17orf78Q8N4C9 275 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 OR13C9Q8NGT0 318 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 LGALS14Q8TCE9 139 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 SOSTQ9BQB4 213 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 MRI1Q9BV20 369 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 TMEM138Q9NPI0 162 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 STEAP1Q9UHE8 339 aa17.03■□□□□ 0.32
CCM2-202ENST00000381112 RP1L1Q8IWN7 2480 aaPredicted RBP17.02■□□□□ 0.32
CCM2-202ENST00000381112 A0A0G2JNJ9 132 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 A0A1W2PR80 420 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 DHRS7CA6NNS2 312 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 SLC17A2O00624 439 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 CALCBP10092 127 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 RAB3AP20336 220 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 BDKRB2P30411 391 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 OPRM1P35372 400 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 ZNF92Q03936 586 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 LRRC28Q86X40 367 aaPredicted RBP17.02■□□□□ 0.32
CCM2-202ENST00000381112 NKAIN3Q8N8D7 197 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 SPSB4Q96A44 273 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 C10orf35Q96D05 121 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 CYSLTR2Q9NS75 346 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 Q9UFV3 132 aa17.02■□□□□ 0.32
CCM2-202ENST00000381112 FABP12A6NFH5 140 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 XRCC2O43543 280 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 EIF4EP06730 217 aaKnown RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 THBS4P35443 961 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 LY6DQ14210 128 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 ZNF79Q15937 498 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 BHLHA15Q7RTS1 189 aaPredicted RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 PAQR4Q8N4S7 273 aaPredicted RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 SLC30A7Q8NEW0 376 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 APOBEC3DQ96AK3 386 aaPredicted RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 OR5V1Q9UGF6 321 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 SH3BGRL2Q9UJC5 107 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 PIGLQ9Y2B2 252 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 PKD1L2Q7Z442 2459 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 hCG_38984A0A1B0GV85 526 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 MSTNO14793 375 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 SULT1B1O43704 296 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 FAHP16930 419 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 ACKR3P25106 362 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 HOXC12P31275 282 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 TNK1Q13470 666 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 OR5AS1Q8N127 324 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 SEMA6DQ8NFY4 1073 aa17.01■□□□□ 0.31
CCM2-202ENST00000381112 AKAP1Q92667 903 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCM2-202ENST00000381112 SDHCQ99643 169 aaPredicted RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 CGGBP1Q9UFW8 167 aaPredicted RBP17.01■□□□□ 0.31
CCM2-202ENST00000381112 ATRXP46100 2492 aa17■□□□□ 0.31
CCM2-202ENST00000381112 FAM25AB3EWG3 89 aa17■□□□□ 0.31
CCM2-202ENST00000381112 FAM25CB3EWG5 89 aa17■□□□□ 0.31
CCM2-202ENST00000381112 FAM25GB3EWG6 89 aa17■□□□□ 0.31
CCM2-202ENST00000381112 APOA1P02647 267 aa17■□□□□ 0.31
CCM2-202ENST00000381112 CELA3BP08861 270 aa17■□□□□ 0.31
CCM2-202ENST00000381112 CBR1P16152 277 aa17■□□□□ 0.31
CCM2-202ENST00000381112 FAM3AP98173 230 aa17■□□□□ 0.31
CCM2-202ENST00000381112 RAB11BQ15907 218 aa17■□□□□ 0.31
CCM2-202ENST00000381112 METAP1DQ6UB28 335 aaPredicted RBP17■□□□□ 0.31
CCM2-202ENST00000381112 PCSK4Q6UW60 755 aa17■□□□□ 0.31
CCM2-202ENST00000381112 FAM131AQ6UXB0 335 aa17■□□□□ 0.31
CCM2-202ENST00000381112 MYPOPQ86VE0 399 aaPredicted RBP17■□□□□ 0.31
CCM2-202ENST00000381112 SNX29P2Q8IUI4 249 aa17■□□□□ 0.31
CCM2-202ENST00000381112 OR52N4Q8NGI2 321 aa17■□□□□ 0.31
CCM2-202ENST00000381112 PP6455Q8WZ26 134 aa17■□□□□ 0.31
CCM2-202ENST00000381112 SLC25A28Q96A46 364 aa17■□□□□ 0.31
CCM2-202ENST00000381112 CMTM3Q96MX0 182 aa17■□□□□ 0.31
CCM2-202ENST00000381112 NKX3-1Q99801 234 aaPredicted RBP17■□□□□ 0.31
CCM2-202ENST00000381112 PIGMQ9H3S5 423 aa17■□□□□ 0.31
CCM2-202ENST00000381112 OBP2BQ9NPH6 170 aa17■□□□□ 0.31
CCM2-202ENST00000381112 ZNF629Q9UEG4 869 aaPredicted RBP17■□□□□ 0.31
CCM2-202ENST00000381112 RHBDD3Q9Y3P4 386 aa17■□□□□ 0.31
CCM2-202ENST00000381112 IGKV1-9A0A0C4DH69 117 aa16.99■□□□□ 0.31
CCM2-202ENST00000381112 OR5H1A6NKK0 313 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms