RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC26A5P58743 744 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 PDZK1IP1Q13113 114 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TTLL10Q6ZVT0 673 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 C9orf40Q8IXQ3 194 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 OR1M1Q8NGA1 313 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 ADAMTS18Q8TE60 1221 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 GLYATL2Q8WU03 294 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM230Q96A57 120 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TGM7Q96PF1 710 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 MED29Q9NX70 200 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 ATPIF1Q9UII2 106 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TRBV6-7A0A0A0MS04 114 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 SNAPINO95295 136 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 TTRP02766 147 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 MUC1P15941 1255 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 AWAT2Q6E213 333 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF101Q8IZC7 436 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 MAML2Q8IZL2 1156 aaPredicted RBP12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM104Q8NE00 496 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 OR51F2Q8NH61 342 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 SOX7Q9BT81 388 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 C5orf66Q9H5L9 145 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 IFT22Q9H7X7 185 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 ZFP57Q9NU63 452 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 AGPAT2O15120 278 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 SOCS1O15524 211 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 SYT7O43581 403 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 AHSA1O95433 338 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 GABRA4P48169 554 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 EMP2P54851 167 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 PJVKQ0ZLH3 352 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 AKIRIN2Q53H80 203 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 ARL5BQ96KC2 179 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 NMES1Q9C002 83 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 BANF2Q9H503 90 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 FSCN3Q9NQT6 498 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 THADAQ6YHU6 1953 aa12.53□□□□□ -0.4
CLCNKA-202ENST00000375692 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 A0A1W2PP11 408 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 TSPAN2O60636 221 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 HSD11B1P28845 292 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 GALNSP34059 522 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 RBM39Q14498 530 aaKnown RBP12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 EBPQ15125 230 aaKnown RBP12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 PLAC9Q5JTB6 97 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 HLA-DQA1Q5Y7H0 255 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 CLEC18BQ6UXF7 455 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 C16orf47Q6ZP98 133 aaPredicted RBP12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC29A4Q7RTT9 530 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 OR10C1Q96KK4 312 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 EMC6Q9BV81 110 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 SEC11CQ9BY50 192 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 RHOFQ9HBH0 211 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 DHCR7Q9UBM7 475 aaKnown RBP12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 CEP192Q8TEP8 1941 aa12.52□□□□□ -0.4
CLCNKA-202ENST00000375692 CPAMD8Q8IZJ3 1885 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 RTTNQ86VV8 2226 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM150CB9EJG8 249 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 BPNT1O95861 308 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 NME1P15531 152 aaKnown RBP12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 ABOP16442 354 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 CX3CR1P49238 355 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 FOXL2P58012 376 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 NAAAQ02083 359 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 ANKRD55Q3KP44 614 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 TMEM128Q5BJH2 165 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 LILRB1Q8NHL6 650 aaPredicted RBP12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 NUBPLQ8TB37 319 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 NRIP2Q9BQI9 281 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 FAM206AQ9NX38 181 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 LPAR3Q9UBY5 353 aa12.52□□□□□ -0.41
CLCNKA-202ENST00000375692 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 RAD51DO75771 328 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 MPIG6BO95866 241 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 ABCD3P28288 659 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 DHPSP49366 369 aaPredicted RBP12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 MEOX2P50222 304 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 BLKP51451 505 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
CLCNKA-202ENST00000375692 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms