RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PLEK2Q9NYT0 353 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 MRPS28Q9Y2Q9 187 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 R4GN57 208 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 COL27A1Q8IZC6 1860 aaPredicted RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 A0A0A6YYD4 124 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 LOC102725191A0A1B0GVB3 256 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 LRRC3CA6NJW4 275 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 M0R296 226 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF35P13682 527 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 FAHP16930 419 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 RSPO1Q2MKA7 263 aaPredicted RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 TEX261Q6UWH6 196 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 THOC3Q96J01 351 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 UTP23Q9BRU9 249 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 HES7Q9BYE0 225 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 EMC3Q9P0I2 261 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 U3KQ87 197 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 KIAA1549Q9HCM3 1950 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 UBE2QL1A1L167 161 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNHIT1O43257 154 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 TPPPO94811 219 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 IGHV3-9P01782 118 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 IL5P05113 134 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 FKBP2P26885 142 aaKnown RBP14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 GDF1P27539 372 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 CARD18P57730 90 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 KCNMB1Q16558 191 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 SFRP5Q5T4F7 317 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 ZBTB37Q5TC79 503 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 C11orf88Q6PI97 169 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 OR10K1Q8NGX5 313 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 AQP3Q92482 292 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 TMEM54Q969K7 222 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 TMEM41AQ96HV5 264 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF845Q96IR2 970 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 SGCZQ96LD1 299 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 IRF2BPLQ9H1B7 796 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 CRLF2Q9HC73 371 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 FREM1Q5H8C1 2179 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 CCDC187A0A096LP49 1063 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 SOCS1O15524 211 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 NOS1APO75052 506 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 CFDP00746 253 aaPredicted RBP14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 TPOP07202 933 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 CPN1P15169 458 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 GRK1Q15835 563 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF529Q6P280 563 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 C1QL2Q7Z5L3 287 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 GGNQ86UU5 652 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 TMEM229BQ8NBD8 167 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF680Q8NEM1 530 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 OR2AE1Q8NHA4 323 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 MOB1AQ9H8S9 216 aa14.05□□□□□ -0.16
CNKSR1-202ENST00000374253 LAMA5O15230 3695 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 TMEM82A0PJX8 343 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 BPNT1O95861 308 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF735P0CB33 412 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 B4GALT1P15291 398 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 GJC3Q8NFK1 279 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 PSMF1Q92530 271 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 ELMOD3Q96FG2 381 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 DMXL1Q9Y485 3027 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SPENQ96T58 3664 aaKnown RBP14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SNRPGP15A8MWD9 76 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 CRTAPO75718 401 aaPredicted RBP14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 ALX3O95076 343 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 CYB561P49447 251 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 MECP2P51608 486 aaKnown RBP14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 CLDN15P56746 228 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 GRB2P62993 217 aaKnown RBP14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SRYQ05066 204 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SSPNQ14714 243 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SNAI3Q3KNW1 292 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 C10orf128Q5T292 105 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF767PQ75MW2 155 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 CDH24Q86UP0 819 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 SPICQ8N5J4 248 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 ZBTB44Q8NCP5 570 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 OR2AK2Q8NG84 335 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 OR14K1Q8NGZ2 314 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 PIGTQ969N2 578 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 MED30Q96HR3 178 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 MICU1Q9BPX6 476 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 UQCC2Q9BRT2 126 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 STRADBQ9C0K7 418 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 FOXD3Q9UJU5 478 aaPredicted RBP14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 KCNK7Q9Y2U2 307 aa14.04□□□□□ -0.16
CNKSR1-202ENST00000374253 VAMP5O95183 116 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 ITGB2P05107 769 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 CXCL2P19875 107 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 RAB6AP20340 208 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 SRD5A2P31213 254 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 HRH1P35367 487 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 LSM6P62312 80 aaKnown RBP14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 CXADRP78310 365 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 POU4F3Q15319 338 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 ATPAF1Q5TC12 328 aaPredicted RBP14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 DOK3Q7L591 496 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 OR13C8Q8NGS7 320 aa14.03□□□□□ -0.16
CNKSR1-202ENST00000374253 OR10D3Q8NH80 312 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms