RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TMEM246Q9BRR3 403 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF416Q9BWM5 594 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 RBM24Q9BX46 236 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 PRDM14Q9GZV8 571 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 CLEC4MQ9H2X3 399 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 CCDC86Q9H6F5 360 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 BCO1Q9HAY6 547 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 TUBG2Q9NRH3 451 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 TMEM38BQ9NVV0 291 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 ING1Q9UK53 422 aaPredicted RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 CLEC4AQ9UMR7 237 aa7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 MRPS18BQ9Y676 258 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-202ENST00000373720 UNC80Q8N2C7 3258 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 TRAV6A0A075B6T7 132 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 IGKV1D-43A0A0B4J1Z2 117 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A0B4J2A0 478 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A1B0GTH9 108 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A10PA6NDY2 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A18PA6NE21 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A16PA6NEW6 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A20PA6NIJ5 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A8PA6NJQ4 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 LRRC3CA6NJW4 275 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A7PA6NKC0 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 C17orf51A8MQB3 221 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CEACAM18A8MTB9 384 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A22PA8MWA6 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A12PA8MX19 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A5PA8MXJ8 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A23PA8MXZ1 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 RAB27BO00194 218 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 SGCEO43556 437 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 MRPL33O75394 65 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 KDM4BO94953 1096 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 WISP1O95388 367 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 GPANK1O95872 356 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 IFNA7P01567 189 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 MT-ND4P03905 459 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 IFNA6P05013 189 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 GDF1P27539 372 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ARR3P36575 388 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CLDN12P56749 244 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 TAS2R46P59540 309 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CYCSP99999 105 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CD300CQ08708 224 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ENDOGQ14249 297 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 PLEKHN1Q494U1 663 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 RNASE10Q5GAN6 216 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 VAX1Q5SQQ9 334 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 AWAT2Q6E213 333 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ASPHD2Q6ICH7 369 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CFAP77Q6ZQR2 320 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 LHFPL2Q6ZUX7 228 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CHMP1BQ7LBR1 199 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 PIP4P1Q86T03 277 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ANGPTL5Q86XS5 388 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 C1orf174Q8IYL3 243 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ZSCAN4Q8NAM6 433 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 UXS1Q8NBZ7 420 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 SEMA6DQ8NFY4 1073 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR2M7Q8NG81 312 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR8B12Q8NGG6 310 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR1J2Q8NGS2 313 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR2I1PQ8NGU4 316 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR1F12Q8NHA8 337 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 OR51E1Q8TCB6 317 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ATOH1Q92858 354 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 FYTTD1Q96QD9 318 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 NPAS1Q99742 590 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 VRK1Q99986 396 aaPredicted RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 MESP1Q9BRJ9 268 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 GINS4Q9BRT9 223 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 TM2D1Q9BX74 207 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CHST6Q9GZX3 395 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 CNTD2Q9H8S5 307 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 GPR84Q9NQS5 396 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 PLEK2Q9NYT0 353 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 IL36GQ9NZH8 169 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 SHPKQ9UHJ6 478 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF222Q9UK12 451 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 HSF4Q9ULV5 492 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 MRPS28Q9Y2Q9 187 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 RHBDD3Q9Y3P4 386 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 ZNF175Q9Y473 711 aa7.67□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A0B4J203 849 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 A0A1B0GW55 424 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 OR5H15A6NDH6 313 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 TNFSF11O14788 317 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 RER1O15258 196 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 FABP7O15540 132 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 SYNGR3O43761 229 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 NME2P1O60361 137 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 NEURL1O76050 574 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 WDPCPO95876 746 aa7.66□□□□□ -1.18
SNRNP40-202ENST00000373720 FCER2P06734 321 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms