RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 FNDC9Q8TBE3 224 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 ST8SIA4Q92187 359 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 PGLYRP3Q96LB9 341 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 KLHDC3Q9BQ90 382 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 PHF3Q92576 2039 aaKnown RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 TMEM272A0A1B0GTI8 110 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 M0R135 149 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 PIN1P1O15428 100 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 SGCEO43556 437 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 TECTAO75443 2155 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 IFITM2Q01629 132 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 IL11RAQ14626 422 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 TRIP6Q15654 476 aaKnown RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 DEFB109BQ30KR1 87 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 ATP1A1-AS1Q5TC04 95 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 C2orf16Q68DN1 1984 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 LRRTM1Q86UE6 522 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 TMEM105Q8N8V8 129 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 OR4D10Q8NGI6 311 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 OR10R2Q8NGX6 335 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 RNF128Q8TEB7 428 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 ZNF799Q96GE5 643 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 SLC25A21Q9BQT8 299 aaPredicted RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 TAS2R5Q9NYW4 299 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
HERC4-202ENST00000373700 MCTS1Q9ULC4 181 aaKnown RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 NOSIPQ9Y314 301 aaKnown RBP6.96□□□□□ -1.3
HERC4-202ENST00000373700 OR5H14A6NHG9 310 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 SSX5O60225 188 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 DIRAS3O95661 229 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 ZNF806P0C7X5 589 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PPP3CBP16298 524 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 MSR1P21757 451 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 MSX1P28360 303 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 GNMTQ14749 295 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PCK2Q16822 640 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CLVS2Q5SYC1 327 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 THEM4Q5T1C6 240 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PXDC1Q5TGL8 231 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 TIGD3Q6B0B8 471 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CD200R1LQ6Q8B3 271 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 TEX261Q6UWH6 196 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 MAML2Q8IZL2 1156 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CT55Q8WUE5 264 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 KISS1RQ969F8 398 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 DLL4Q9NR61 685 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 U3KQ87 197 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 HEATR5AQ86XA9 2040 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 A0A1B0GUH1 482 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 A0A1W2PR80 420 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 H7C2Y5 167 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PMS2P2O95744 297 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 ABHD16AO95870 558 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PNPP00491 289 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 OR8U9P0C7N5 309 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PET100P0DJ07 73 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CD46P15529 392 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PVALBP20472 110 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 GALP22466 123 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 DUSP1P28562 367 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 THBS2P35442 1172 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CLDN15P56746 228 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 INSM1Q01101 510 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 ACSM1Q08AH1 577 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 ZBTB37Q5TC79 503 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 GCNT2Q8N0V5 402 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 SECTM1Q8WVN6 248 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 UCN2Q96RP3 112 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PIGQQ9BRB3 760 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CHST6Q9GZX3 395 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 MTFP1Q9UDX5 166 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 CADP27708 2225 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 OR5H15A6NDH6 313 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 ANKUB1A6NFN9 424 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 SPRY1O43609 319 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 LMX1BO60663 402 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 S100A9P06702 114 aaKnown RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 NME2P22392 152 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 SERPINF1P36955 418 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 IAH1Q2TAA2 248 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 PLEKHN1Q494U1 663 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 VHLLQ6RSH7 139 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 OR11G2Q8NGC1 345 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 OR5M9Q8NGP3 310 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 STK35Q8TDR2 534 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 RBPMSQ93062 196 aaKnown RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 MRGPRX4Q96LA9 322 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 RTN4RQ9BZR6 473 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 METTL9Q9H1A3 318 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 SAV1Q9H4B6 383 aaPredicted RBP6.95□□□□□ -1.3
HERC4-202ENST00000373700 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 PCDHB16Q9NRJ7 776 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 IGKV1D-42A0A075B6H8 117 aa6.95□□□□□ -1.3
HERC4-202ENST00000373700 MEX3AA1L020 520 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms