RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 AMER3Q8N944 861 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 OR13D1Q8NGV5 346 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 PRRX2Q99811 253 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 C12orf10Q9HB07 376 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 CCL27Q9Y4X3 112 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 F5P12259 2224 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 ANKRD20A5PA0PJZ0 165 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 PHOX2AO14813 284 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 F10P00742 488 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 NRASP01111 189 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 TBXA2RP21731 343 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 PNLIPRP2P54317 469 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 SCAND1P57086 179 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 SNRPEP62304 92 aaKnown RBP15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 PPP1R1AQ13522 171 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 IRF3Q14653 427 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 RBMXL3Q8N7X1 1067 aaKnown RBP15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 C4orf45Q96LM5 186 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 ZNF816-ZNF321PA0A0X1KG74 233 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 WDR1O75083 606 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 CTAG2O75638 210 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 GLAP06280 429 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 TCN2P20062 427 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 RAB13P51153 203 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 SLC35G3Q8N808 338 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 ZNF321PQ8N8H1 164 aa15.46■□□□□ 0.07
PTP4A1-201ENST00000370651 CD46P15529 392 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 NPBWR1P48145 328 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 SHBQ15464 509 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 S100A7AQ86SG5 101 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 FAM185AQ8N0U4 392 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 UTP23Q9BRU9 249 aaKnown RBP15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 BRWD1Q9NSI6 2320 aa15.46■□□□□ 0.06
PTP4A1-201ENST00000370651 METTL15P1P0C7V9 234 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ZNF79Q15937 498 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 MIDNQ504T8 468 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 DBX2Q6ZNG2 339 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 MMP25Q9NPA2 562 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 PISDQ9UG56 409 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 SIPA1L3O60292 1781 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 LINC01553A4QN01 128 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 IDSB3KWA1 339 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 NKX2-2O95096 273 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ZNF121P58317 390 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 TOMM34Q15785 309 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 THSD4Q6ZMP0 1018 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 C10orf111Q8N326 155 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 KTI12Q96EK9 354 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ZNF331Q9NQX6 463 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 TIMM10BQ9Y5J6 103 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 NHSQ6T4R5 1651 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 SCN1AP35498 2009 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 RAB27BO00194 218 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ABOP16442 354 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 FPR2P25090 351 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ZNF90Q03938 601 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 FAM53BQ14153 422 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 INTS12Q96CB8 462 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 C6orf106Q9H6K1 298 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 TNRC6CQ9HCJ0 1690 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 FRG2CA6NGY1 282 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ZNF732B4DXR9 585 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 IGHV3-9P01782 118 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 CD96P40200 585 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 NCR3LG1Q68D85 454 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 OXGR1Q96P68 337 aa15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 TRAF4Q9BUZ4 470 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 ACTR3CQ9C0K3 210 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-201ENST00000370651 TMEM272A0A1B0GTI8 110 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 CDC42EP2O14613 210 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 LPAL2Q16609 132 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 RPS19BP1Q86WX3 136 aaKnown RBP15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 MORN4Q8NDC4 146 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 GPR31O00270 319 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 MPC2O95563 127 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 FABP1P07148 127 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 SULT1A3P0DMM9 295 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 SULT1A4P0DMN0 295 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 CCR2P41597 374 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 PPP2CBP62714 309 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 PPP2CAP67775 309 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 BTNL8Q6UX41 500 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 RDH5Q92781 318 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 CXorf58Q96LI9 332 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 RCL1Q9Y2P8 373 aaKnown RBP15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 V9GYS6 101 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 A0A1W2PPQ1 181 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 PLA1AQ53H76 456 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 RABEPKQ7Z6M1 372 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 RAB18Q9NP72 206 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 SCN9AQ15858 1988 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 LINC00862A6NCI5 91 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 FFAR1O14842 300 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 WNT11O96014 354 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 CD27P26842 260 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 DVL1P1P54792 670 aaPredicted RBP15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 DMKNQ6E0U4 476 aaPredicted RBP15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 PARM1Q6UWI2 310 aa15.44■□□□□ 0.06
PTP4A1-201ENST00000370651 OR10P1Q8NGE3 313 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms